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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bathy13g00550 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
|
Family |
C2H2 |
Protein Properties |
Length: 297aa MW: 35201.9 Da PI: 8.3843 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bathy13g00550 | genome | ORCAE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 18 | 7.9e-06 | 77 | 99 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C k+F + s L H r H
Bathy13g00550 77 HECGVCEKVFVSASKLAIHVRIH 99
78*******************99 PP
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2 | zf-C2H2 | 22.7 | 2.6e-07 | 105 | 127 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F ++ nLk H+r H
Bathy13g00550 105 YECDVCEKCFHTSGNLKAHMRIH 127
99*******************99 PP
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3 | zf-C2H2 | 25.8 | 2.7e-08 | 133 | 155 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C C k+F+++snLkrH r H
Bathy13g00550 133 FECDVCEKRFRDSSNLKRHKRIH 155
89*******************99 PP
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4 | zf-C2H2 | 24.8 | 5.4e-08 | 161 | 183 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+Fs++ +L+ H+r H
Bathy13g00550 161 YECDVCEKRFSQSGHLQYHMRIH 183
99*******************99 PP
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5 | zf-C2H2 | 26.7 | 1.4e-08 | 189 | 211 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k F+++s+Lk+H+r H
Bathy13g00550 189 YECDVCEKAFRHSSTLKKHMRIH 211
99*******************99 PP
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6 | zf-C2H2 | 22.7 | 2.5e-07 | 217 | 239 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F+++s+Lk H+r H
Bathy13g00550 217 YECDVCEKCFRHSSTLKAHMRFH 239
99*******************99 PP
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7 | zf-C2H2 | 23.7 | 1.2e-07 | 245 | 267 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F ++snLk+H+r H
Bathy13g00550 245 YECDVCEKCFHTSSNLKKHMRIH 267
99*******************99 PP
|
8 | zf-C2H2 | 24.7 | 5.9e-08 | 273 | 296 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
y+C C k+F+++ +LkrH rt H
Bathy13g00550 273 YECDVCEKRFTQSGHLKRHVRTqH 296
99********************99 PP
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Protein Features
? help Back to Top |
 |
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
PROSITE profile | PS50157 | 14.295 | 77 | 104 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.0068 | 77 | 99 | IPR015880 | Zinc finger, C2H2-like |
Gene3D | G3DSA:3.30.160.60 | 1.7E-6 | 77 | 96 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE pattern | PS00028 | 0 | 79 | 99 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 8.96E-22 | 85 | 142 | No hit | No description |
Gene3D | G3DSA:3.30.160.60 | 6.6E-18 | 97 | 124 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 14.627 | 105 | 132 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 2.3E-4 | 105 | 127 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF00096 | 1.9E-5 | 105 | 127 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 107 | 127 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 5.1E-18 | 125 | 152 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 16.664 | 133 | 160 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 2.6E-4 | 133 | 155 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF00096 | 6.6E-6 | 133 | 155 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 135 | 155 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.65E-24 | 142 | 198 | No hit | No description |
Gene3D | G3DSA:3.30.160.60 | 4.3E-19 | 153 | 187 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 16.436 | 161 | 188 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 9.7E-5 | 161 | 183 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF00096 | 1.2E-5 | 161 | 183 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 163 | 183 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 8.1E-19 | 188 | 218 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SMART | SM00355 | 1.8E-4 | 189 | 211 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF00096 | 2.9E-6 | 189 | 211 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 17.038 | 189 | 216 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 191 | 211 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 4.62E-23 | 197 | 254 | No hit | No description |
PROSITE profile | PS50157 | 16.061 | 217 | 244 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.015 | 217 | 239 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF12874 | 0.0098 | 217 | 237 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 219 | 239 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 1.5E-16 | 219 | 246 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SuperFamily | SSF57667 | 1.7E-20 | 239 | 291 | No hit | No description |
SMART | SM00355 | 3.3E-4 | 245 | 267 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 16.581 | 245 | 272 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 247 | 267 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 5.5E-18 | 247 | 273 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
Pfam | PF13465 | 2.6E-10 | 259 | 283 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 2.3E-4 | 273 | 296 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 12.861 | 273 | 296 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 4.8E-12 | 274 | 294 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE pattern | PS00028 | 0 | 275 | 296 | IPR007087 | Zinc finger, C2H2 |
Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MGGRRKNPNP KRAENARTVL KSEHVPEKRG GEEEEEEEPD EVLLCVRIPD EDEVNEQMRK 60 EEMTVRKGAK RKRGQQHECG VCEKVFVSAS KLAIHVRIHT NEKPYECDVC EKCFHTSGNL 120 KAHMRIHTNE RSFECDVCEK RFRDSSNLKR HKRIHTNEKP YECDVCEKRF SQSGHLQYHM 180 RIHTNEKPYE CDVCEKAFRH SSTLKKHMRI HTNEKPYECD VCEKCFRHSS TLKAHMRFHT 240 NEKPYECDVC EKCFHTSSNL KKHMRIHTNE KPYECDVCEK RFTQSGHLKR HVRTQH*
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Annotation -- Protein
? help Back to Top |
Source |
Hit ID |
E-value |
Description |
Refseq | XP_007509407.1 | 0.0 | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein |
Swissprot | A6NK53 | 4e-74 | ZN233_HUMAN; Zinc finger protein 233 |
TrEMBL | K8F304 | 0.0 | K8F304_9CHLO; PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein) |
STRING | XP_007509407.1 | 0.0 | (Bathycoccus prasinos) |