 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Bathy09g04110 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
|
| Family |
C2H2 |
| Protein Properties |
Length: 183aa MW: 21297.3 Da PI: 4.6251 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bathy09g04110 | genome | ORCAE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 25.2 | 4.1e-08 | 103 | 125 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F++ nLk+H r H
Bathy09g04110 103 YECDVCEKCFTTAGNLKKHKRIH 125
99*******************99 PP
|
| 2 | zf-C2H2 | 26 | 2.3e-08 | 131 | 153 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C k+Fs + +Lk+H+r H
Bathy09g04110 131 YECEVCEKRFSESGSLKTHMRIH 153
99*******************99 PP
|
| 3 | zf-C2H2 | 26.9 | 1.2e-08 | 159 | 182 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
y+C C+k F++ +L++H+rt H
Bathy09g04110 159 YECDVCDKAFRQYGHLQSHMRTqH 182
99********************99 PP
|
| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF57667 | 9.56E-14 | 85 | 131 | No hit | No description |
| Gene3D | G3DSA:3.30.160.60 | 2.3E-16 | 100 | 124 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| Pfam | PF00096 | 5.3E-6 | 103 | 125 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 1.8E-4 | 103 | 125 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 16.29 | 103 | 130 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 105 | 125 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 4.94E-20 | 125 | 177 | No hit | No description |
| Gene3D | G3DSA:3.30.160.60 | 1.9E-18 | 125 | 150 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| Pfam | PF00096 | 1.7E-5 | 131 | 153 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 8.8E-5 | 131 | 153 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 16.124 | 131 | 158 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 133 | 153 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 1.3E-15 | 151 | 180 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE profile | PS50157 | 12.799 | 159 | 182 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF00096 | 9.2E-7 | 159 | 182 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 4.5E-5 | 159 | 182 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 161 | 182 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MARRKNPHPQ RAVNVKTVVV GDDEEEEPVL CLQIPPDDDD DDVVVVVDDD DDDDDDDDDD 60
DDEMDEQTRK EETTFRKGSK RKRTQHECGV CEKSFSTDNE KPYECDVCEK CFTTAGNLKK 120
HKRIHTNEKP YECEVCEKRF SESGSLKTHM RIHTKERPYE CDVCDKAFRQ YGHLQSHMRT 180
QH*
|
| Annotation -- Protein
? help Back to Top |
| Source |
Hit ID |
E-value |
Description |
| Refseq | XP_007511163.1 | 1e-130 | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein |
| Swissprot | P08155 | 2e-28 | KRH1_DROME; Krueppel homolog 1 |
| Swissprot | Q8TF45 | 2e-28 | ZN418_HUMAN; Zinc finger protein 418 |
| TrEMBL | K8F324 | 1e-129 | K8F324_9CHLO; PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein) |
| STRING | XP_007511163.1 | 1e-129 | (Bathycoccus prasinos) |
