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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Bathy04g02730 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
|
| Family |
C2H2 |
| Protein Properties |
Length: 217aa MW: 25627 Da PI: 8.267 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bathy04g02730 | genome | ORCAE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 25.4 | 3.5e-08 | 81 | 103 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C C k+F ++s L rH+r H
Bathy04g02730 81 HECDVCEKVFVTPSKLARHMRIH 103
78*******************99 PP
|
| 2 | zf-C2H2 | 27.3 | 9e-09 | 109 | 131 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F+++ +Lk+H+rtH
Bathy04g02730 109 YECDVCEKRFTQSGDLKTHMRTH 131
99********************9 PP
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| 3 | zf-C2H2 | 28 | 5.4e-09 | 137 | 159 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F+++s+Lk+H+r H
Bathy04g02730 137 YECDVCEKRFTQSSSLKSHMRIH 159
99*******************99 PP
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| 4 | zf-C2H2 | 26.7 | 1.4e-08 | 165 | 187 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F+r+ +L++H+r H
Bathy04g02730 165 YECDVCEKRFRRSGDLQTHMRIH 187
99*******************98 PP
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| 5 | zf-C2H2 | 28.2 | 4.4e-09 | 193 | 216 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
y+C C k+Fs++snLk+H+r+ H
Bathy04g02730 193 YECDECEKRFSQSSNLKTHMRNfH 216
99*******************999 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF57667 | 1.05E-19 | 80 | 131 | No hit | No description |
| SMART | SM00355 | 1.4E-4 | 81 | 103 | IPR015880 | Zinc finger, C2H2-like |
| Gene3D | G3DSA:3.30.160.60 | 6.4E-16 | 81 | 109 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE profile | PS50157 | 15.272 | 81 | 108 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF00096 | 2.6E-6 | 81 | 103 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 83 | 103 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 4.2E-5 | 109 | 131 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 16.186 | 109 | 136 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF00096 | 1.1E-6 | 109 | 131 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 3.8E-16 | 110 | 128 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE pattern | PS00028 | 0 | 111 | 131 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 9.63E-25 | 118 | 174 | No hit | No description |
| Gene3D | G3DSA:3.30.160.60 | 1.9E-20 | 129 | 156 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| SMART | SM00355 | 5.8E-5 | 137 | 159 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 16.934 | 137 | 164 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF00096 | 7.3E-7 | 137 | 159 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 139 | 159 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 5.7E-19 | 157 | 184 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| SuperFamily | SSF57667 | 5.01E-21 | 159 | 211 | No hit | No description |
| SMART | SM00355 | 3.1E-5 | 165 | 187 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 15.958 | 165 | 192 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF00096 | 1.7E-6 | 165 | 187 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 167 | 189 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 3.9E-17 | 185 | 213 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| SMART | SM00355 | 5.3E-4 | 193 | 216 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 14.025 | 193 | 216 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF00096 | 1.1E-6 | 193 | 216 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 195 | 216 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MTGSSRRKNK HPKRAENVKT VVVVRKGGDR EEEGDDDDDV ERLRRMLMCV PCDDDVVEQN 60
HQMREEETAC IAKGVKRKRG HECDVCEKVF VTPSKLARHM RIHTNEKPYE CDVCEKRFTQ 120
SGDLKTHMRT HTKEKPYECD VCEKRFTQSS SLKSHMRIHT NEKPYECDVC EKRFRRSGDL 180
QTHMRIHTHE KPYECDECEK RFSQSSNLKT HMRNFH*
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| Annotation -- Protein
? help Back to Top |
| Source |
Hit ID |
E-value |
Description |
| Refseq | XP_007513685.1 | 1e-158 | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein |
| TrEMBL | K8EUR1 | 1e-157 | K8EUR1_9CHLO; PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein) |
| STRING | XP_007513685.1 | 1e-158 | (Bathycoccus prasinos) |
