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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Bathy04g01230 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
|
| Family |
C2H2 |
| Protein Properties |
Length: 202aa MW: 24060.2 Da PI: 8.9758 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bathy04g01230 | genome | ORCAE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 27.4 | 8.2e-09 | 10 | 32 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C ksF+r+++Lk+H r H
Bathy04g01230 10 YECGVCEKSFRRSDDLKKHTRIH 32
99*******************99 PP
|
| 2 | zf-C2H2 | 28.2 | 4.6e-09 | 38 | 60 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+Fsr + L++H+r H
Bathy04g01230 38 YECDVCEKRFSRADALQSHMRIH 60
99*******************99 PP
|
| 3 | zf-C2H2 | 29.1 | 2.3e-09 | 66 | 88 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C+k F+++s+Lk+H+r H
Bathy04g01230 66 YECDVCDKAFRHSSSLKVHMRIH 88
99*******************99 PP
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| 4 | zf-C2H2 | 24.2 | 8.8e-08 | 94 | 116 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F+++ Lk H+r H
Bathy04g01230 94 YECDVCEKRFTQSGALKYHMRIH 116
99*******************99 PP
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| 5 | zf-C2H2 | 23.9 | 1.1e-07 | 122 | 144 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C k+F+++ +L++H rtH
Bathy04g01230 122 YECDVCEKRFRTSGSLTQHKRTH 144
99********************9 PP
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| 6 | zf-C2H2 | 29.3 | 2e-09 | 150 | 172 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
ykC C k+F++++nLk+H+rtH
Bathy04g01230 150 YKCDVCEKRFRTSDNLKTHMRTH 172
9*********************9 PP
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| 7 | zf-C2H2 | 20.4 | 1.3e-06 | 178 | 200 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
ykC C +Fs+ nL++H r H
Bathy04g01230 178 YKCVVCEARFSQLGNLQSHVRIH 200
9*********************6 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF57667 | 6.6E-20 | 4 | 56 | No hit | No description |
| Gene3D | G3DSA:3.30.160.60 | 4.2E-16 | 7 | 31 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE profile | PS50157 | 16.29 | 10 | 37 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 9.7E-4 | 10 | 32 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF00096 | 1.0E-6 | 10 | 32 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 12 | 32 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 7.7E-19 | 32 | 58 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE profile | PS50157 | 15.771 | 38 | 65 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 1.9E-5 | 38 | 60 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF00096 | 1.5E-6 | 38 | 60 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 40 | 60 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 2.49E-24 | 47 | 103 | No hit | No description |
| Gene3D | G3DSA:3.30.160.60 | 7.0E-18 | 59 | 84 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE profile | PS50157 | 16.914 | 66 | 93 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 5.3E-5 | 66 | 88 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF00096 | 3.1E-7 | 66 | 88 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 68 | 88 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 5.0E-20 | 85 | 114 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| SMART | SM00355 | 5.0E-5 | 94 | 116 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 16.186 | 94 | 121 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 96 | 116 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 7.3E-24 | 103 | 159 | No hit | No description |
| Pfam | PF13465 | 2.6E-10 | 108 | 133 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 3.7E-17 | 115 | 141 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE profile | PS50157 | 16.103 | 122 | 149 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 2.2E-4 | 122 | 144 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 124 | 144 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 3.0E-19 | 142 | 170 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| SuperFamily | SSF57667 | 7.2E-20 | 144 | 196 | No hit | No description |
| Pfam | PF13912 | 2.7E-7 | 150 | 172 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 1.8E-5 | 150 | 172 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 16.29 | 150 | 177 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 152 | 172 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 9.7E-16 | 171 | 200 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| PROSITE profile | PS50157 | 11.219 | 178 | 201 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13894 | 3.4E-4 | 178 | 201 | No hit | No description |
| SMART | SM00355 | 0.0015 | 178 | 200 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 180 | 201 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MRTHTNERPY ECGVCEKSFR RSDDLKKHTR IHTNEKPYEC DVCEKRFSRA DALQSHMRIH 60
ANEKPYECDV CDKAFRHSSS LKVHMRIHTN EKPYECDVCE KRFTQSGALK YHMRIHTNEK 120
PYECDVCEKR FRTSGSLTQH KRTHTNEKPY KCDVCEKRFR TSDNLKTHMR THTNEKPYKC 180
VVCEARFSQL GNLQSHVRIH H*
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| Annotation -- Protein
? help Back to Top |
| Source |
Hit ID |
E-value |
Description |
| Refseq | XP_007513606.1 | 1e-148 | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein |
| Swissprot | A6NK53 | 3e-72 | ZN233_HUMAN; Zinc finger protein 233 |
| TrEMBL | K8EDN6 | 1e-146 | K8EDN6_9CHLO; PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein) |
| STRING | XP_007513606.1 | 1e-147 | (Bathycoccus prasinos) |
