PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bathy02g02000
Organism
Bathycoccus prasinos
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
Family bZIP
Protein Properties Length: 511aa    MW: 56081.7 Da    PI: 10.1618
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bathy02g02000genomeORCAEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-11425471147
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                    e +l++e r +kNR +A rsR+RK++ i eL+e++  L+ eN+a+++
  Bathy02g02000 425 ETKLRAEERVYKNRQSAARSRARKLKTIGELQEEISRLTCENDAMRD 471
                    568999**************************************994 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-8421471No hitNo description
SMARTSM003385.6E-5425492IPR004827Basic-leucine zipper domain
PfamPF001704.5E-8426471IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.6427470IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-8429471No hitNo description
CDDcd147071.34E-12429482No hitNo description
PROSITE patternPS000360433447IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MPKAKPNNNN KKSSQQPDPI GDDLGALEDI SPQIALQKWS SDVVNRLGVS STSLFHPDAS  60
GDFDVQLEKL ITKNRENNNN NNNNNNNDAL KRSKSNTSSS QSKSPGLSSG DPIKSGDLAH  120
LGFPFDGQIG KDELKESLRE AFREMSDVKV KPMNNDNAKK KKTKTKMIST ATTARKSGGE  180
VASLDDAWAK INSGKKRGND NDANGRGKDE TTLEDVMMDV VMANNAKKIG NGNVKRTATA  240
SLIMAQKSLF SAGAQDLANT LGVAHTQNAS SMEQMVNEAN LTSYDTEMAK MLSTFGSGSG  300
SGGNAFDQHA KRTSYNQALE KEMDKKKENK KPLPTPSKRK QKDDGDDDAA KKQKRNKDSE  360
EANMKKRKVS KTNVPRVEID NTQIVELTKE NKNLIVTPGG IKDALPPRKK GRRPNNPTVV  420
ETEEETKLRA EERVYKNRQS AARSRARKLK TIGELQEEIS RLTCENDAMR DLCKDSGVTE  480
ATITTKLKES EATRQKEKKE QEELGANVKK *
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFO0822770.0FO082277.1 Bathycoccus prasinos genomic : Chromosome_2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007514874.10.0unknown protein
TrEMBLK8EBC90.0K8EBC9_9CHLO; Uncharacterized protein
STRINGXP_007514874.10.0(Bathycoccus prasinos)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP702533