 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA040507-PA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
Dof |
| Protein Properties |
Length: 319aa MW: 31618.5 Da PI: 9.9464 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA040507-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 121.4 | 3.3e-38 | 35 | 93 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
+e lkcprCdstntkfCy+nnysl+qPr+fCkaCrryWt+GGalrnvPvGgg r+nk+
BGIOSGA040507-PA 35 PEPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRNVPVGGGFRRNKR 93
56789****************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MAAAGILPVS GGGGASSARP ASMAERARMA KIPQPEPGLK CPRCDSTNTK FCYFNNYSLT 60
QPRHFCKACR RYWTRGGALR NVPVGGGFRR NKRGTKPSNS KKPAAAVAGG VMAPPHAQLQ 120
LPFGFDGGGG GGGHGSIIGG GGGGGASRLG FPELSSLHAA AAVDYQLGGG GGGDGLGLER 180
QRLPHFPFLA RSNAAVHPLP LMSTAAGISY PFGDVAAGGL GGDMPANAAS VAGSAGLITQ 240
MASVKMDDID NHPPPSAATT TASSPIEFLG LRGSLQFWGG GGGHRDGGDG AGGSAAPGGG 300
GGGWSDLPAF DLSTSGNIL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK068542 | 0.0 | AK068542.1 Oryza sativa Japonica Group cDNA clone:J013155H18, full insert sequence. |
| GenBank | AP004303 | 0.0 | AP004303.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0407H12. |
| GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
