 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
BGIOSGA035911-PA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
Dof |
| Protein Properties |
Length: 272aa MW: 28251 Da PI: 10.7933 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA035911-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 110.7 | 7.1e-35 | 47 | 101 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
+cprC s++tkfCyynny+++qPr+fC+aCrryWt GG+lrnvP+Gg++rk+ +
BGIOSGA035911-PA 47 EQCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPR 101
68**************************************************876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MEAPLHQSPV PLLPPPRVVG VQQQQQQEAV VPPPPAMAAA AGGGGREQCP RCASRDTKFC 60
YYNNYNTAQP RHFCRACRRY WTLGGSLRNV PIGGSTRKRP RPSRPARAAV AAASPPPPRR 120
ARAAPXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXA AASGGGGGGG LLVSLLGAAP 180
VLEGRLGGGI GVDLLGGEQL GFGAMAMPPA PLLWPARVLE GGDAWKSAAA AAGVSYFPFP 240
ALWQELAAAA PVELAGGGGL LRHGGGGAPQ LM
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012620 | 0.0 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
