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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA035742-PA |
| Common Name | OsI_37089 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
GRAS |
| Protein Properties |
Length: 481aa MW: 53220.8 Da PI: 4.6931 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA035742-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 214.4 | 6.1e-66 | 229 | 473 | 2 | 242 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+lL++cA+av++gd + a++lL+++++++s +gd++qR+a +f+e+L+arla+++s++y++l +++ts +++ l+a+klf ++ i k+s
BGIOSGA035742-PA 229 HTLLIHCAQAVATGDWRSATELLKQIKQNSSARGDATQRMACCFAEGLEARLAGTGSQMYQSLVAKRTS---TVDFLKAYKLFTAACCIKKVS 318
679************************************************************999999...8******************** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
+ N++I++av+g +++Hi+D+++s+G+QWpaL+ L +R++gpp++R+Tg++ p++g ++++eetg+rL+ A+++gvpf+f++ +a +
BGIOSGA035742-PA 319 VIFSNKTIYNAVAGRRKLHIVDYGLSYGFQWPALFFLLGAREGGPPEVRMTGIDVPQPGfrPADQIEETGRRLSICARQFGVPFKFRA-IAAK 410
**********************************************************9*****************************.799* PP
GRAS 186 ledleleeLrvkp....gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvv 242
+e+++ e+L+++p +E+l+Vn+ + l +l desv ++s +rd vL+ +++++P+v+v +
BGIOSGA035742-PA 411 WETVRREDLHLDPeeeeEEVLVVNCLHGLNTLQDESVVVDSpsPRDVVLDNIRDMRPHVFVQC 473
************9999999*****************98888779****************976 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 481 aa
Download sequence Send
to blast |
MAAAPKPEEL VVAIEQPFSP SLFLDLPPTP HHDDDPNNVN DDLLLPFISR ILMEDDIDDK 60
FFYQFPDHPA LLQAQQSYAQ ILHAPATSSS SDDTTINNNT TNSTSVPDTL AMPDHDADTQ 120
SAPDDMEMLN MAFLKGREEA TNGGGRGRKN RHAEEDDLET ETSRSSKLMA PEHDDAAAAD 180
EIFDEIILNG YQMIIKGIDE LRVVMGSQSQ ADKNGRRASR AKTAVVDLHT LLIHCAQAVA 240
TGDWRSATEL LKQIKQNSSA RGDATQRMAC CFAEGLEARL AGTGSQMYQS LVAKRTSTVD 300
FLKAYKLFTA ACCIKKVSVI FSNKTIYNAV AGRRKLHIVD YGLSYGFQWP ALFFLLGARE 360
GGPPEVRMTG IDVPQPGFRP ADQIEETGRR LSICARQFGV PFKFRAIAAK WETVRREDLH 420
LDPEEEEEEV LVVNCLHGLN TLQDESVVVD SPSPRDVVLD NIRDMRPHVF VQCVVNGAYG 480
D
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC137064 | 0.0 | AC137064.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence. |
| GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |
