PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA035675-PA
Common NameOsI_36957
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 1303aa    MW: 147658 Da    PI: 7.5088
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA035675-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.21.5e-2210411102159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY    1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                        ++Dg++W KYGqK++ g+ +prsY+rC ++   gC ++k+v+ +++d ++++++Y geH+++
  BGIOSGA035675-PA 1041 VEDGFSWVKYGQKDILGTMYPRSYFRCIHRhtkGCLATKQVQPTDDDHQILDVIYYGEHTCD 1102
                        58*************************9988899**************************97 PP
2WRKY75.94.8e-2411621223159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY    1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                        ldDgy+Wr+YG K++ g+++prsY+rCt++   gC ++k+++r + dp +++++Y+g+H+++
  BGIOSGA035675-PA 1162 LDDGYSWRRYGLKDILGAKYPRSYFRCTHRntqGCVATKQIQRRDGDPLLFDVVYHGDHTCS 1223
                        59***************************98889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147982.04E-7275No hitNo description
SuperFamilySSF525401.6E-55199470IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3006.5E-17216387IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009315.4E-53217496IPR002182NB-ARC
PRINTSPR003645.6E-14235250No hitNo description
PRINTSPR003645.6E-14307321No hitNo description
PRINTSPR003645.6E-14404418No hitNo description
SuperFamilySSF520584.76E-24535909IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.108.6E-19551578IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.108.6E-19630860IPR032675Leucine-rich repeat domain, L domain-like
PROSITE profilePS5081119.01510361104IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-2210361103IPR003657WRKY domain
SuperFamilySSF1182901.03E-2110391103IPR003657WRKY domain
SMARTSM007748.0E-3610411103IPR003657WRKY domain
PfamPF031061.1E-2210421102IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-2511491223IPR003657WRKY domain
SuperFamilySSF1182901.05E-2211561223IPR003657WRKY domain
PROSITE profilePS5081120.8411571220IPR003657WRKY domain
SMARTSM007744.7E-3611621224IPR003657WRKY domain
PfamPF031067.9E-2311631222IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1303 aa     Download sequence    Send to blast
MVVRCWMKEV RELSYDIEDS IDQYEHAARS QNRPNIHHRK FNRWRGNKIP CIPQKLKQRL  60
WMANKIREFS LRIQDALQRH AMYNNLGGVA GTASTTRGDV CSATPWHPTK TQFREHVDNV  120
RSVSIDVDGM EAALNDLNKL KNLLAGIPTA SLVQFREHAD KVRGIHTDIE AILNKLENIP  180
PGITTTTTTT RGDVSSTSSR QPTLFMESTC HVGIDAAMNK LENLLDLCGE EKLKVVSIVG  240
VGGVGKTTLA NKLYRKLRWQ FECRAFVRTS QKTDMRRLLI NILLQIRSHQ SPDNWKVHSL  300
ISSIRTYLQD KRFLIVIDDL WATSTWDIIK CALPEGNKSS RILTTTEIED LALQSCSYDL  360
KFIFKMIPFG EDDSRKLLFS IVFGSHSKCP PEVSETLYDI VRKCGGLPLA IVTVASLLAS  420
QLDKLEQWDY INLSLGYSLM ANPTLEGMKQ LLNLCYNNLP QHLKACMLYL SMYQGDHIIW  480
KDDLVNQWIA EGFICATEEH DKEEISRGYF DELVGRKIIQ PVHIDDSGEV LSCVVHHIVL  540
NFVTYKSIEE NFIIAIDHSQ ATIRFADKVR RLSIHFNNVE DAPPPTNMRL FQVRTIAFFG  600
VLKYMPFIME FRLIKVLFLH FLGDEDSTGI VDLTKISELV RLRYLKVTSN ATVKLPTRLQ  660
GLPYLETLKI DGKISEVPTD IYLPGLLHLT LPAKTNLPNG IVHMTSLRTI GYFDLSCNSA  720
ENLWSLGELT NLRDLQLAYS EIHSDNLKDN MKYLGSILGK LRNLTSITLS PPGSSCPDTL  780
HIDRDTKRRI NVDGWSSVSS PPALLQRFEL LPCVCVFSNL PNWIGQLGNL CILKIGIREV  840
TSNNIDVLGV LPELTVLSLY VHTKPAERIV FDNAGFSILK YFEFICSVAW MKFEMGAMPS  900
LRKLKLGFDV HRADQHDIIP VGIEHLSGLE EISAKIRVAC SAHDHCKRFA ESAMSNAFMM  960
HPGRPSVNIR CVDWTFDGKD DDNVRTQEEE HRTLQKQHHT AKEGSNEKSP VKQRDPREGA  1020
HKSVDGRETL RRIRVKVSST VEDGFSWVKY GQKDILGTMY PRSYFRCIHR HTKGCLATKQ  1080
VQPTDDDHQI LDVIYYGEHT CDQSARSDDR QLKSSRPAAS SNLQEPQQPG LEQSRPAAKR  1140
RRKTVRWKTQ VRVSSVQDVG PLDDGYSWRR YGLKDILGAK YPRSYFRCTH RNTQGCVATK  1200
QIQRRDGDPL LFDVVYHGDH TCSERASLNE QVTWPRSSAS STEQSSTITY TAAAGSVEDD  1260
EEGVTSATNF LSMDDMLDLG GGDVIDMDFP SFDFDAIDAF LLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6s2p_N2e-4321555015347NRC1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.985430.0callus| flower| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO379907250.0
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0660530.0AK066053.1 Oryza sativa Japonica Group cDNA clone:J013052I15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015617274.10.0disease resistance protein RGA5-like
RefseqXP_025877036.10.0disease resistance protein RGA5-like
TrEMBLB8BIG60.0B8BIG6_ORYSI; Uncharacterized protein
STRINGONIVA03G01340.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27511933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-32WRKY family protein