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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
BGIOSGA034522-PA |
Common Name | OsI_35054 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family |
GRAS |
Protein Properties |
Length: 463aa MW: 52706.6 Da PI: 7.2052 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
BGIOSGA034522-PA | genome | RIS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 272 | 1.8e-83 | 20 | 439 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkf 93
v lL ecA +v++g++e+a+ ++++ l ++ p+q l + ++ L +rl++s ++ly al +ps+ + s+ aa++ f+++ P+l
BGIOSGA034522-PA 20 VPLLHECASHVTEGSFEKADFSFKKIRMLT-IADGPLQHLSKIIVDSLDHRLLSSIQGLYGALiNPSDYF--EKSTLRAARHNFFKLNPYLST 109
6789**********************9876.5667*************************9995555554..35555567788********** PP
GRAS 94 shltaNqaIleavege....ervHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+++t N+aI+ea+e e + vHi+D++ s ++ QW+ Ll+ + Rp+g+p+l +T++++ +++ l e+++ L+k Ae+lgv+f+f
BGIOSGA034522-PA 110 GFVTINRAIMEAMEDEkvelQVVHIVDLSCSaaHPWQWLKLLDDFHGRPGGAPELYLTVLHD----DNDFLAEMQSLLSKKAESLGVSFHFIS 198
****************9998999*****8653389***************************....9************************** PP
GRAS 181 lvakrledleleeLrvkp....gEalaVnlvlqlhrll.........................................desvsleserdevL 228
v rle+l++++Lr g a+a++++lq+hrll s +++ ++L
BGIOSGA034522-PA 199 -VIGRLETLDFSNLRSTFqikfGVAVAISCALQMHRLLlvddnlsstsiaqlqkmanftqpkqmassvcspastlnylqTPSPRTPKLLARLL 290
.799**********54444555*******************************************************98666777778899** PP
GRAS 229 klvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres...eerikvErellgreivnvvacegaerrerhetlekWrer 318
++++ l+P+++ ++eq+adhn+ F +rf e l+yy+alfd+++a ++++ +er vEr++l++ei+n++ ceg +r +rhe+l +W +
BGIOSGA034522-PA 291 SAIQALKPNIMLIMEQDADHNTLLFRDRFNEVLNYYAALFDCFHAVAAANPgrtDERLRVERMILREEIKNILVCEGVHRHKRHERLDQWAMH 383
*******************************************77654444456*************************************** PP
GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ee+GF++v+ls +a + k l ++ + + +e++g+l+l+W +L+s+SaWr
BGIOSGA034522-PA 384 MEESGFHNVQLSFSAIREGKENLLSFGLKNCQNKEDRGCLLLCWGYTNLYSISAWR 439
***************************888*************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MMHGLWVQDQ GMVDHLAQLV PLLHECASHV TEGSFEKADF SFKKIRMLTI ADGPLQHLSK 60 IIVDSLDHRL LSSIQGLYGA LINPSDYFEK STLRAARHNF FKLNPYLSTG FVTINRAIME 120 AMEDEKVELQ VVHIVDLSCS AAHPWQWLKL LDDFHGRPGG APELYLTVLH DDNDFLAEMQ 180 SLLSKKAESL GVSFHFISVI GRLETLDFSN LRSTFQIKFG VAVAISCALQ MHRLLLVDDN 240 LSSTSIAQLQ KMANFTQPKQ MASSVCSPAS TLNYLQTPSP RTPKLLARLL SAIQALKPNI 300 MLIMEQDADH NTLLFRDRFN EVLNYYAALF DCFHAVAAAN PGRTDERLRV ERMILREEIK 360 NILVCEGVHR HKRHERLDQW AMHMEESGFH NVQLSFSAIR EGKENLLSFG LKNCQNKEDR 420 GCLLLCWGYT NLYSISAWRQ NRGSSSGSRE HMLVQRQIIW PFQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK242794 | 0.0 | AK242794.1 Oryza sativa Japonica Group cDNA, clone: J090058A05, full insert sequence. |