 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA022141-PA |
| Common Name | OsI_21297 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
GRAS |
| Protein Properties |
Length: 479aa MW: 50813.8 Da PI: 5.8308 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA022141-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 206.9 | 1.1e-63 | 127 | 478 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel....aspdgd...pmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfse 86
lv+ Ll++A+ +++gd + a+++Larl+++ sp g p+ R+aa + AL a p+s+t + ++ +laa+k++ +
BGIOSGA022141-PA 127 LVDDLLDAARLLDAGDSTSAREILARLNHRlpslPSPPGHahpPLLRAAALLRDALLPPTAL---------PVSST-PLDVPLKLAAHKALAD 209
5789*************************976666676655668899999999998665554.........44333.4669999********* PP
GRAS 87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa...sRp..egppslRiTgvgspesgskeeleetgerLakfAeelgv 174
+sP+++f+ +t qa l+a+ +++r+H +Dfd++ G++Wp+L+q+La + ++pp+l++T+++sp s++ el+ t+e L++fA+elg+
BGIOSGA022141-PA 210 ASPTVQFTTFTSTQAFLDALGSARRLHLLDFDVGFGAHWPPLMQELAhhwR-RaaGPPPNLKVTALVSPGSSHPLELHLTNESLTRFAAELGI 301
***********************************************5533.3578889********************************** PP
GRAS 175 pfefnvlvakrledlel.eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysa 266
pfef++lv + l++ ++ L+ p+Ea+aV+l + + ++ L++vk+l+P vvv+v++ +++++ l+ l+ ++a
BGIOSGA022141-PA 302 PFEFTALVFDPLSSASPpLGLSAAPDEAVAVHLTAGSGAFS--------PAPAHLRVVKELRPAVVVCVDHGCERGA-------LNLLRSCAA 379
**********999986515799999**********998887........56789********************966.......5667899** PP
GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
l++sl+a ++ + +kvE+++l+++++ + g +++l +aGF ++++s+ a++qa++llr+++s+g++ve++ ++l
BGIOSGA022141-PA 380 LLESLDAA-GASPDVVSKVEQFVLRPRVERLAVGVGGG--------PPLQSMLASAGFAALQVSNAAEAQAECLLRRTASHGFHVEKRPAALA 463
*****988.5666999*************998877776........67799****************************************** PP
GRAS 360 lgWkdrpLvsvSaWr 374
l W++ +LvsvSaWr
BGIOSGA022141-PA 464 LWWQRSELVSVSAWR 478
**************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 479 aa
Download sequence Send
to blast |
MSSSSCHPHN PTTLPLPEPD SSKSPEPTSV LYNRSSPSTS LGSCSSKPPE DPPPPPIAAD 60
DDCDWDAVVD MHMHMLAPAP APDSSFLRWI MDTGYADADT FPDHPSFDSD LLQLPMPMPS 120
DHPPQPLVDD LLDAARLLDA GDSTSAREIL ARLNHRLPSL PSPPGHAHPP LLRAAALLRD 180
ALLPPTALPV SSTPLDVPLK LAAHKALADA SPTVQFTTFT STQAFLDALG SARRLHLLDF 240
DVGFGAHWPP LMQELAHHWR RAAGPPPNLK VTALVSPGSS HPLELHLTNE SLTRFAAELG 300
IPFEFTALVF DPLSSASPPL GLSAAPDEAV AVHLTAGSGA FSPAPAHLRV VKELRPAVVV 360
CVDHGCERGA LNLLRSCAAL LESLDAAGAS PDVVSKVEQF VLRPRVERLA VGVGGGPPLQ 420
SMLASAGFAA LQVSNAAEAQ AECLLRRTAS HGFHVEKRPA ALALWWQRSE LVSVSAWRC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
