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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
BGIOSGA022020-PA |
| Common Name | OsI_21459 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
GRAS |
| Protein Properties |
Length: 618aa MW: 66010 Da PI: 6.4339 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA022020-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 390.2 | 2.3e-119 | 217 | 595 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqa.lLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevs 88
lv++L++cA+ +s+g++e+a+ +Larl e+asp+g +pm+R+aayfteALa r++r++++++++ pp+e +++ ++ ++al++++ ++
BGIOSGA022020-PA 217 LVRALTACADSLSAGNHEAANYyYLARLGEMASPAGpTPMHRVAAYFTEALALRVVRMWPHMFDIGPPRELTDDAfggGDDDAMALRILNAIT 309
6899****************9637************************************************9989999************** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181
Pi++f h+t N+ +l+++eg+ervH+iDfdi+qGlQWp Llq+La+R+ +p+++RiTgvg+ s++el+etg rLa++A++lg+ fef++
BGIOSGA022020-PA 310 PIPRFLHFTLNERLLREFEGHERVHVIDFDIKQGLQWPGLLQSLAARAVPPAHVRITGVGE----SRQELQETGARLARVAAALGLAFEFHA- 397
*************************************************************....9**************************. PP
GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsl.e 272
v++rled++l++L+vk+gE++aVn+vl++hrll+++++l++ +L l +s+ ++++ + e+e ns+++ +rf++al+yy+a fd++ +
BGIOSGA022020-PA 398 VVDRLEDVRLWMLHVKRGECVAVNCVLAMHRLLRDDAALTD----FLGLARSTGATILLLGEHEGGGlNSGRWEARFARALRYYAAAFDAVdA 486
7************************************9999....*******************8777***********************99 PP
GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrveee.......sgs 357
a+lp++s +r+k E++ ++rei+n+va eg er+erhe+++ Wr+r+e+ GFk++ ++e++a+q +++ r+++ d y+v+ + ++
BGIOSGA022020-PA 487 AGLPEASPARAKAEEM-FAREIRNAVAFEGPERFERHESFAGWRRRMEDgGGFKNAGIGEREAMQGRMIARMFGPDKYTVQAHggggsggGEA 578
99**************.*******************************9679**********************888****888888886777 PP
GRAS 358 lvlgWkdrpLvsvSaWr 374
l+l W d+pL++v+aW+
BGIOSGA022020-PA 579 LTLRWLDQPLYTVTAWT 595
88**************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 618 aa
Download sequence Send
to blast |
MLAGCSFSSS RHQMSTAQRF DILPCGFSKR GSRGDGAAPR VAGDARSGAT TCSFRTHPAP 60
PVTQSVSWGA KPEPGGNGNG AHRAVKRAHD EDAVEEYGPI VRAKRTRMGG DGDEVWFHQS 120
IAGTMQATAA GEGEEAEEEK VFLVPSAAAF PHGMAAAGPS LAAAKKEEYS KSPSDSSSSS 180
GTDGGSSAMM PPPQPPEFDA RNGVPAPGQA EREALELVRA LTACADSLSA GNHEAANYYY 240
LARLGEMASP AGPTPMHRVA AYFTEALALR VVRMWPHMFD IGPPRELTDD AFGGGDDDAM 300
ALRILNAITP IPRFLHFTLN ERLLREFEGH ERVHVIDFDI KQGLQWPGLL QSLAARAVPP 360
AHVRITGVGE SRQELQETGA RLARVAAALG LAFEFHAVVD RLEDVRLWML HVKRGECVAV 420
NCVLAMHRLL RDDAALTDFL GLARSTGATI LLLGEHEGGG LNSGRWEARF ARALRYYAAA 480
FDAVDAAGLP EASPARAKAE EMFAREIRNA VAFEGPERFE RHESFAGWRR RMEDGGGFKN 540
AGIGEREAMQ GRMIARMFGP DKYTVQAHGG GGSGGGEALT LRWLDQPLYT VTAWTPAGDG 600
AGGSTVSAST TASHSQQS
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| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in the shoot apical meristem (SAM) and elongating cells of young seedlings. Expressed in leaf joints, culms, internodes, stems, young panicles, primary roots and lateral roots. {ECO:0000269|PubMed:19220793}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as positivie regulator of brassinosteroid (BR) signaling (PubMed:19220793, PubMed:22685166). Functions downstream of BRI1 and GSK2 to modulate BR responses. Acts as a direct target of GSK2 kinase to mediate BR responses (PubMed:22685166). Involved in feedback inhibition of BR biosynthetic genes. Repressed by BZR1 (PubMed:19220793). {ECO:0000269|PubMed:19220793, ECO:0000269|PubMed:22685166}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269|PubMed:19220793}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
| Publications
? help Back to Top |
- Tong H,Chu C
Roles of DLT in fine modulation on brassinosteroid response in rice.
Plant Signal Behav, 2009. 4(5): p. 438-9
[PMID:19816111] - Li W, et al.
Identification and characterization of dwarf 62, a loss-of-function mutation in DLT/OsGRAS-32 affecting gibberellin metabolism in rice.
Planta, 2010. 232(6): p. 1383-96
[PMID:20830595] - Tong H, et al.
DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice.
Plant Cell, 2012. 24(6): p. 2562-77
[PMID:22685166] - Zhang C,Bai MY,Chong K
Brassinosteroid-mediated regulation of agronomic traits in rice.
Plant Cell Rep., 2014. 33(5): p. 683-96
[PMID:24667992] - Yang C,Shen W,He Y,Tian Z,Li J
OVATE Family Protein 8 Positively Mediates Brassinosteroid Signaling through Interacting with the GSK3-like Kinase in Rice.
PLoS Genet., 2016. 12(6): p. e1006118
[PMID:27332964]
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