 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA020952-PA |
| Common Name | OsI_23552 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
FAR1 |
| Protein Properties |
Length: 265aa MW: 31033 Da PI: 8.741 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA020952-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 53.9 | 5.8e-17 | 30 | 108 | 1 | 79 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevt 79
kfY +YAk GFsvrk++ k++ +gei++r+fvCs+eg+re ++ + t+++r++ a t +gC akl++++++ +g+ +v+
BGIOSGA020952-PA 30 KFYVDYAKGKGFSVRKNNLKRK--DGEIIWRQFVCSCEGYRELKHFErTDRKREPWALTCCGCLAKLEIERNEeKGVHRVM 108
6****************99887..9*****************99987678889999***************9977777776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MSSSYVSLED QEEYKMMGTV VFSSEEEGYK FYVDYAKGKG FSVRKNNLKR KDGEIIWRQF 60
VCSCEGYREL KHFERTDRKR EPWALTCCGC LAKLEIERNE EKGVHRVMSD SKKAQAVELR 120
MSGLRPFQIM EVMENNHDES DEDIRNFSSR STSLCKTDEN SPASTKPGVG EEVSTLKRKG 180
IIRFWQQRKD FKEISKDEYF AKNNEFATWS KEEKGKFFSD LSLESARDLF EKFVKTWNKG 240
KLPSQYYEGI TRGPRSAHRW NIKAS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012614 | 1e-167 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
