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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
BGIOSGA020743-PA |
| Common Name | OsI_23998 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
bZIP |
| Protein Properties |
Length: 295aa MW: 31911.7 Da PI: 7.2214 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA020743-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 55.2 | 1.5e-17 | 134 | 187 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
e kr rr+ +NRe+ArrsR+RK+a++ eLe v++L++eN++L k+l e +++
BGIOSGA020743-PA 134 ETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQF 187
68******************************************8888877765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MMKKCPSELQ LEAFIREEAG AGDRKPGVLS PGDGARKSGV FSPGDGEMSV LDQSTLDGSG 60
GGHQLWWPES VRTPPRAAAA FSATADERTP ASISDDPKPT TSANHAPESD SDSDCDSLLE 120
AERSPRLRGT KSTETKRIRR MVSNRESARR SRRRKQAQLS ELESQVEQLK GENSSLFKQL 180
TESSQQFNTA VTDNRILKSD VEALRVKVKM AEDMVARAAM SCGLGQLGLA PLLSSRKMCQ 240
ALDMLSLPRN DACGFKGLNL GRQVQNSPVQ SAASLESLDN RISSEVTSCS ADVWP
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 148 | 155 | RRSRRRKQ |
| 2 | 150 | 155 | SRRRKQ |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Os.1503 | 0.0 | callus| flower| leaf| panicle| root| seed| stem |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed in developing seeds at low levels from 5 to 20 days after flowering (DAF). {ECO:0000269|PubMed:11133985}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). May function as a negative regulator in cold and drought stress responses (PubMed:22189955). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:22189955}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by cold stress in roots. {ECO:0000269|PubMed:22189955}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CT832853 | 0.0 | CT832853.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113E18, full insert sequence. |
| Publications
? help Back to Top |
- Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
J. Biol. Chem., 2001. 276(17): p. 14139-52
[PMID:11133985] - Liu C,Wu Y,Wang X
bZIP transcription factor OsbZIP52/RISBZ5: a potential negative regulator of cold and drought stress response in rice.
Planta, 2012. 235(6): p. 1157-69
[PMID:22189955]
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