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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
BGIOSGA020491-PA |
| Common Name | OsI_21249 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
bHLH |
| Protein Properties |
Length: 289aa MW: 31608.2 Da PI: 9.3719 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA020491-PA | genome | RIS | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 38.2 | 2.6e-12 | 2 | 50 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h ++Er+RR+++N+ + Lr+l P + k+ + a+i A+++Ik+Lq
BGIOSGA020491-PA 2 SHIAVERNRRRQMNDHLKVLRSLTPAF---YIKRGDQASIIGGAIDFIKELQ 50
89************************9...9********************9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MSHIAVERNR RRQMNDHLKV LRSLTPAFYI KRGDQASIIG GAIDFIKELQ TLLQSLEAQK 60
KRRQQPQAHL ISPASISASG GGSPSPTPSP RSLITSCSPT AAAGSSAGSS SSISPKDENK 120
QQLQLVAELA ACCNSPMADV EARISGANVL LARSLGAPLP SGSSPFSRAS ISRCSISTSP 180
PWTTPSSTPS SSRSASTATS ASTTLPWRST SPSCRHLQPT PIITSIPSYL PTLICFFYIY 240
NSIVTSHDSS CMFHCFIYIY IYIYIYIYIY IYIYIYIYIY IYIYIFLLS
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Strongly expressed in meristemoids and at lower levels in guard mother cells (GMCs) and guard cells. {ECO:0000269|PubMed:17183265, ECO:0000269|PubMed:17183267}. |
| Uniprot | TISSUE SPECIFICITY: Leaf epidermis and flowers. {ECO:0000269|PubMed:12679534, ECO:0000269|PubMed:17183265}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Together with FMA and SPCH, regulates the stomata formation. Required for the differentiation of stomatal guard cells, by promoting successive asymmetric cell divisions and the formation of guard mother cells. Promotes the conversion of the leaf epidermis into stomata. {ECO:0000269|PubMed:17183265, ECO:0000269|PubMed:17183267}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By UV, flagellin, and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012613 | 0.0 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
| Publications
? help Back to Top |
- Casson S,Gray JE
Influence of environmental factors on stomatal development.
New Phytol., 2008. 178(1): p. 9-23
[PMID:18266617] - Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Balcerowicz M,Ranjan A,Rupprecht L,Fiene G,Hoecker U
Auxin represses stomatal development in dark-grown seedlings via Aux/IAA proteins.
Development, 2014. 141(16): p. 3165-76
[PMID:25063454] - de Marcos A, et al.
Transcriptional profiles of Arabidopsis stomataless mutants reveal developmental and physiological features of life in the absence of stomata.
Front Plant Sci, 2015. 6: p. 456
[PMID:26157447] - Mahoney AK, et al.
Functional analysis of the Arabidopsis thaliana MUTE promoter reveals a regulatory region sufficient for stomatal-lineage expression.
Planta, 2016. 243(4): p. 987-98
[PMID:26748914] - Klermund C, et al.
LLM-Domain B-GATA Transcription Factors Promote Stomatal Development Downstream of Light Signaling Pathways in Arabidopsis thaliana Hypocotyls.
Plant Cell, 2016. 28(3): p. 646-60
[PMID:26917680] - Fu ZW,Wang YL,Lu YT,Yuan TT
Nitric oxide is involved in stomatal development by modulating the expression of stomatal regulator genes in Arabidopsis.
Plant Sci., 2016. 252: p. 282-289
[PMID:27717464] - Qi X, et al.
Autocrine regulation of stomatal differentiation potential by EPF1 and ERECTA-LIKE1 ligand-receptor signaling.
Elife, 2018.
[PMID:28266915] - Raissig MT, et al.
Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata.
Science, 2017. 355(6330): p. 1215-1218
[PMID:28302860] - Lee JH,Jung JH,Park CM
Light Inhibits COP1-Mediated Degradation of ICE Transcription Factors to Induce Stomatal Development in Arabidopsis.
Plant Cell, 2017. 29(11): p. 2817-2830
[PMID:29070509] - Han SK, et al.
MUTE Directly Orchestrates Cell-State Switch and the Single Symmetric Division to Create Stomata.
Dev. Cell, 2018. 45(3): p. 303-315.e5
[PMID:29738710]
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