 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA020465-PA |
| Common Name | OsI_21187 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
CPP |
| Protein Properties |
Length: 214aa MW: 23998.9 Da PI: 7.6176 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA020465-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 34.5 | 4.2e-11 | 6 | 44 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
e+ +C+C +s+C ++YC+Cf ++ +Cs++C+C++C N +
BGIOSGA020465-PA 6 ERPKCSCVQSSCTQLYCRCFRSRYFCSDNCNCSGCYNIK 44
5679********************************965 PP
|
| 2 | TCR | 45.7 | 1.3e-14 | 105 | 143 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
k+ kgC+C+kskC k+YCeCf++ + C+ +CkC++C+N+
BGIOSGA020465-PA 105 KHAKGCSCRKSKCSKLYCECFKNSVGCTAKCKCQECSNS 143
589***********************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MANNQERPKC SCVQSSCTQL YCRCFRSRYF CSDNCNCSGC YNIKYYEDAI EEISDMIQMK 60
NPNAFDPRII VSVQDATAAD PQSSTSAISD PKNTSDAMPG NEQRKHAKGC SCRKSKCSKL 120
YCECFKNSVG CTAKCKCQEC SNSFGVKNSE SSNKPDPDDK SATDGLTHEE TTTENITLPG 180
ETWNSDPNKR PRYFIMMIYR PPGSDHFLPK KTQL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC098598 | 1e-130 | AC098598.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1007_H05, complete sequence. |
| GenBank | AP014961 | 1e-130 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012613 | 1e-130 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G04850.1 | 2e-21 | Tesmin/TSO1-like CXC domain-containing protein |
