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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
BGIOSGA020382-PA |
| Common Name | OsI_21027 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
MYB |
| Protein Properties |
Length: 249aa MW: 26961.8 Da PI: 6.0266 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA020382-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.2 | 2.8e-16 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd+ lv++++ G g W+t ar g++Rt+k+c++rw++yl
BGIOSGA020382-PA 22 KGPWTMEEDLSLVNYIAANGEGAWNTLARAAGLNRTGKSCRLRWLNYL 69
79********************************************97 PP
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| 2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eE+ l+v++ +++G++ W++Iar+++ gRt++++k++w++
BGIOSGA020382-PA 75 RGNITPEEHTLIVELQARWGNR-WSKIARYLP-GRTDNEIKNFWRT 118
7999******************.*********.***********96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0080086 | Biological Process | stamen filament development |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MQYTVEGSGG GGVQTVEAAV RKGPWTMEED LSLVNYIAAN GEGAWNTLAR AAGLNRTGKS 60
CRLRWLNYLR PDVRRGNITP EEHTLIVELQ ARWGNRWSKI ARYLPGRTDN EIKNFWRTKI 120
QKKHRKSTDG IYATTTSESI MPAATVHQNT VAEDQGSSSV SGRTTTATVA VTQEYATEAP 180
PPSGMSSDNY LDQLQPGYAS SIHGGQDGGA AAAAAGDVVV SDEFLAASSD NFWALEDLWP 240
TVQSLHGNC
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Mainly expressed in floral tissues. expressed in all four whorls of the flower, in the anther vascular tissue and in cells at the junction between anther and stamen filaments. Detected in the nectaries and ovules. {ECO:0000269|PubMed:16805732, ECO:0000269|PubMed:19325888, ECO:0000269|Ref.1}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in photomorphogenesis in the light. May act downstream of the light receptor network and directly affects transcription of light-induced genes. In darkness, its probable degradation prevent the activation of light-induced genes. Required to activate expression of PAL. Acts redundantly with MYB24 and MYB57 to control stamen filament elongation in the late developed flowers. Contributes with MYB24 to induction of MYB108 by jasmonate. Repressed at the transcript levels by DELLA proteins. {ECO:0000269|PubMed:11967090, ECO:0000269|PubMed:16805732, ECO:0000269|PubMed:19091873, ECO:0000269|PubMed:19325888, ECO:0000269|PubMed:21447791}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by jasmonate. {ECO:0000269|PubMed:16805732}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012613 | 0.0 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Su Z, et al.
Flower development under drought stress: morphological and transcriptomic analyses reveal acute responses and long-term acclimation in Arabidopsis.
Plant Cell, 2013. 25(10): p. 3785-807
[PMID:24179129] - Liu Z, et al.
A Conserved Cytochrome P450 Evolved in Seed Plants Regulates Flower Maturation.
Mol Plant, 2015. 8(12): p. 1751-65
[PMID:26388305] - Chen X,Huang H,Qi T,Liu B,Song S
New perspective of the bHLH-MYB complex in jasmonate-regulated plant fertility in arabidopsis.
Plant Signal Behav, 2016. 11(2): p. e1135280
[PMID:26829586] - Huang H, et al.
Arabidopsis MYB24 Regulates Jasmonate-Mediated Stamen Development.
Front Plant Sci, 2017. 8: p. 1525
[PMID:28928760]
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