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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA019645-PA | ||||||||
Common Name | OsI_19531 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 139aa MW: 14832.5 Da PI: 9.8291 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.5 | 6e-11 | 11 | 82 | 1 | 78 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknrat 78 l pG + +P+d+elv yL ++++g++l+l e+d +++ P++L + +++ +e +f ++++ k+a+gkr++ ++ BGIOSGA019645-PA 11 LLPGPKLDPSDDELVGGYLLRRLQGQPLPL-----EADPLSARPRNLAAD-HGRGDEAFFLAEAQAKNAKGKRQRSTV 82 5799***********************999.....79**********844.456679999999999999998887643 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-11 | 4 | 83 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 10.378 | 11 | 139 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-5 | 13 | 127 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence Send to blast |
MAAAAAGADG LLPGPKLDPS DDELVGGYLL RRLQGQPLPL EADPLSARPR NLAADHGRGD 60 EAFFLAEAQA KNAKGKRQRS TVEGQEHLLA DHGRGDEAAF FADAWAKNGK RQKQRSTVEG 120 GGLWQGAGDA RGRREAPRR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 78 | KGKRQR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC135424 | 1e-141 | AC135424.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0015F11, complete sequence. | |||
GenBank | AC144742 | 1e-141 | AC144742.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBb0052F16, complete sequence. | |||
GenBank | AP014961 | 1e-141 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. | |||
GenBank | CP012613 | 1e-141 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025882797.1 | 9e-32 | NAC transcription factor 32 | ||||
TrEMBL | B8AWZ7 | 9e-92 | B8AWZ7_ORYSI; Uncharacterized protein | ||||
STRING | ORUFI05G13700.1 | 7e-67 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP802 | 22 | 137 |