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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
BGIOSGA016169-PA |
| Common Name | OsI_15446, RR28 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
ARR-B |
| Protein Properties |
Length: 380aa MW: 42779.4 Da PI: 5.2645 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA016169-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 27.8 | 5.5e-09 | 173 | 219 | 4 | 55 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
l Wtp L ++F++a+e LG + + l +m+v+ + ++++ HLQk+Rl
BGIOSGA016169-PA 173 LMWTPHLQKKFLHALEILG-EGQ----ISLMIMDVDNIDRKQISTHLQKHRL 219
78****************5.542....34789*******************8 PP
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| 2 | Response_reg | 47.1 | 1.3e-16 | 15 | 122 | 2 | 107 |
EEESSSHHHHHHHHHHHH.HTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
Response_reg 2 livdDeplvrellrqale.kegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91
+++d+++ ++ ++++ + ++ v++++++ +al+ l+++ ++l+l D++m +m+G+e+lk re ++++++i+++++ + +++++++
BGIOSGA016169-PA 15 MVIDEDKCHADSTCSMICtQLNF-CVTVFTSPIKALDFLQNQAegVHLVLADVQMEEMNGFEFLKVARELHKSIQVIMMSTETTIYTMKRCVQ 106
6776666666665555554999*.***************999999************************************************ PP
TTESEEEESS--HHHH CS
Response_reg 92 aGakdflsKpfdpeel 107
+Ga+ + Kp d +
BGIOSGA016169-PA 107 LGAQILVKKPLDVVTI 122
**********987655 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000160 | Biological Process | phosphorelay signal transduction system |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009736 | Biological Process | cytokinin-activated signaling pathway |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 380 aa
Download sequence Send
to blast |
MAQNEGIPNG TLSAMVIDED KCHADSTCSM ICTQLNFCVT VFTSPIKALD FLQNQAEGVH 60
LVLADVQMEE MNGFEFLKVA RELHKSIQVI MMSTETTIYT MKRCVQLGAQ ILVKKPLDVV 120
TIQNLWQHLD IKVLKMEKIK DMLQGVGDKS TCANEMNSFP ENQKDGTKRK YYLMWTPHLQ 180
KKFLHALEIL GEGQISLMIM DVDNIDRKQI STHLQKHRLQ LKKKLSKASF TKGSNEDTSN 240
PSAKNHLTCR TMTLQPHPYT NQPAETTMQI HSEDVEHDDI YDAMRRALQD GTAFDESKYS 300
SDPFSNEDED VVGDGYADKA NAIDSSGDHY QVAVVLTTPH NVDYTQEIMN KVTTSDDVQV 360
TRGGKATVSR LVDYSDSDSD
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012612 | 0.0 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. |
