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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
BGIOSGA016167-PA |
| Common Name | OsI_15444, RR29 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
ARR-B |
| Protein Properties |
Length: 390aa MW: 43356.9 Da PI: 5.7511 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA016167-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 48.2 | 2.4e-15 | 173 | 222 | 4 | 55 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
l Wtp L ++F++a++ L G++ A Pk+i+++m+v+ + +++ HLQk+Rl
BGIOSGA016167-PA 173 LMWTPHLQKKFLHALQIL-GKD-ASPKNIKKIMGVDNIDCRQIAAHLQKHRL 222
78****************.665.****************************8 PP
|
| 2 | Response_reg | 53 | 2e-18 | 15 | 123 | 2 | 108 |
EEESSSHHHHHHHHHHHH.HTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
Response_reg 2 livdDeplvrellrqale.kegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91
+++d+++ ++ +l+ + ++ +v++++++ +al+ l+++ +Dl+l D+ m +m+G+++lk re ++++++i+++++ ++ ++++++k
BGIOSGA016167-PA 15 MVIDEDKCHADSTSYMLSaELNF-SVTVFTSPIKALDFLQNHAegVDLVLADVHMEEMNGFDFLKVARELHKSIQVIMMSTETTMYTMKRCVK 106
899***************9999*.******************999************************************************ PP
TTESEEEESS--HHHHH CS
Response_reg 92 aGakdflsKpfdpeelv 108
+Ga+ + Kp d +
BGIOSGA016167-PA 107 LGAQFLVNKPLDAGTIK 123
**********9987765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MAQKEGLPAG RLSAMVIDED KCHADSTSYM LSAELNFSVT VFTSPIKALD FLQNHAEGVD 60
LVLADVHMEE MNGFDFLKVA RELHKSIQVI MMSTETTMYT MKRCVKLGAQ FLVNKPLDAG 120
TIKNLWQYVD LKVLRMEKIK DLLQGIGDES TCANETNSLA ENPKNDTKKK YYLMWTPHLQ 180
KKFLHALQIL GKDASPKNIK KIMGVDNIDC RQIAAHLQKH RLRLTKDLKK ASFTTDTSKD 240
ESNSRIGPAE SHHVCRNAST LQPRSNTQPT ETTMQILSED AEYDDVYAAM RRALQYGIVF 300
DESKHSSDPS GDEDEQVVVG GDQDGCANEA NDIDSSGDHH QVAAVVTKPC NTNASQEIIN 360
KMTNSDGMQA TKGSKAAVFR LVDYSESDSD
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL662963 | 0.0 | AL662963.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence. |
| GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012612 | 0.0 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. |
