 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
BGIOSGA015142-PA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
S1Fa-like |
| Protein Properties |
Length: 76aa MW: 8473.17 Da PI: 10.6608 |
| Description |
S1Fa-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA015142-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | S1FA | 131.8 | 1.8e-41 | 9 | 76 | 4 | 70 |
S1FA 4 akvea.kGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
++e+ kGlnPG ivllvv++ll++f+vgny+ly+yaqk+lPPrkkkPvskkklkreklkqGv++PGe
BGIOSGA015142-PA 9 IIEEVnKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKLKREKLKQGVSAPGE 76
456777*************************************************************8 PP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | DNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK289133 | 1e-126 | AK289133.1 Oryza sativa Japonica Group cDNA, clone: J090099A10, full insert sequence. |
| GenBank | BT129157 | 1e-126 | BT129157.1 Oryza sativa clone RRlibA00156 mRNA sequence. |
| GenBank | BT130526 | 1e-126 | BT130526.1 Oryza sativa clone RRlibC01181 mRNA sequence. |
