PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA013858-PA
Common NameOsI_14155
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 324aa    MW: 34838.5 Da    PI: 4.2842
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA013858-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.56.7e-2091541128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrd..kkyatgkrknratk.....s 80 
                       l pG+ FhP+d+ l++ +L++++++ ++e  + i+++d+y+++P +L         ++++++ wyfF++    +k +t+ r++ra+      +
  BGIOSGA013858-PA   9 LEPGYVFHPSDDGLITLFLRPSIAKIPFED-RLINHADVYSADPAELVGehrpapGTHGSSSVWYFFCSPPftSKRKTSGRRQRAVGgggggE 100
                       579************************998.88**************7335666655557779*****8751144445667777655444447 PP

               NAM  81 gyWkatgkdkevlskkgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                       ++Wk+ g +k+v+ ++g+ vg  + + +       +g+a++ ++  W+m ey l
  BGIOSGA013858-PA 101 SVWKSEGGKKAVIGADGRRVGYLQKFSYGvyesssSGSARTFTRLGWCMTEYGL 154
                       78********************99999966677766889999999*******76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.5E-337173IPR003441NAC domain
PROSITE profilePS5100529.1939173IPR003441NAC domain
PfamPF023655.3E-1211153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MADDDEIALE PGYVFHPSDD GLITLFLRPS IAKIPFEDRL INHADVYSAD PAELVGEHRP  60
APGTHGSSSV WYFFCSPPFT SKRKTSGRRQ RAVGGGGGGE SVWKSEGGKK AVIGADGRRV  120
GYLQKFSYGV YESSSSGSAR TFTRLGWCMT EYGLDDDAID GADKQVLCKV YRSPRAVCAE  180
ARTAAAAAKS ADSPFSGSKR KADDGADQPE APPSARPRQE EAGSEHGEQP AILPELDLDA  240
LLSAPMDDNL GVEFDTATTE QYMRYLMNDE PLPWAPTMEV AGGGDEFIET TNGPCMDEEE  300
IIARLAAGEI LDDILGTNPN EASF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629669.10.0NAC domain-containing protein 71-like
RefseqXP_015629670.10.0NAC domain-containing protein 71-like
TrEMBLA2XNL10.0A2XNL1_ORYSI; Uncharacterized protein
STRINGONIVA03G41430.10.0(Oryza nivara)
STRINGONIVA03G41480.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43632158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.22e-09NAC family protein