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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
BGIOSGA013837-PA |
| Common Name | OsI_14102 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
Dof |
| Protein Properties |
Length: 355aa MW: 35070 Da PI: 9.7068 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA013837-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 123.2 | 8.8e-39 | 55 | 115 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++
BGIOSGA013837-PA 55 PEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 115
56789*****************************************************987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MPPHHGGLMA PRPDMVAAAV AASGGGGGGG GPTGGTAVRP GSMTERARLA KIPQPEPGLK 60
CPRCESTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NKRTKSSKSS 120
SSTSAAGSAS ATGGTSSSTS STATGGSSSA AAAAAMMPPQ AQLPFLASLH HPLGGGDHYS 180
SGASRLGFPG LSSLDPVDYQ LGGGAAAAAA IGLEQWRLPQ IQQLPFLSRN DAMPPPMSGI 240
YPFDAEAAAD AAGFAGQLLA GTKVPGSSGL ITQLASVKME DSNAQSAAMN SSPREFLGLP 300
GNLQFWGGGN GAGPGGNGDG ATGGSGAGVA PGGGGSGGGW ADLSGFNSSS SGNIL
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Specific to both elongating procambial cells and to cells isodiametric in size that are presumably destined to develop into higher-order veins. Strongly expressed in advance of perceptible procambium formation. Expressed in the cells of prospective veins in leaf primordia of seedlings and cotyledons of developing embryos, and the vascular tissue of developing flower buds. {ECO:0000269|PubMed:17583520}. |
| Uniprot | TISSUE SPECIFICITY: Expressed ubiquitously, especially in the vascular tissues, except in seeds, petals and anthers (PubMed:20807212). Specific to the vascular tissues in young leaves, cotyledons and flower buds (PubMed:17583520). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) form a short-range concentration gradient that peaks at protophloem sieve elements (PSE) (PubMed:30626969). {ECO:0000269|PubMed:17583520, ECO:0000269|PubMed:20807212, ECO:0000269|PubMed:30626969}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Binds to 5'-TAAAGT-3' motif in REV promoter to triggers its transcription, thus regulating adaxial-abaxial polarity and influencing leaf axial patterning in an auxin transport- and response-dependent manner (e.g. IAA6 and IAA19 genes expression) (PubMed:20807212). Probably involved in early processes for vascular development (PubMed:17583520). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:17583520, ECO:0000269|PubMed:20807212, ECO:0000269|PubMed:30626969}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cytokinin in procambium. {ECO:0000269|PubMed:30626969}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012611 | 0.0 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
