PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 210aa MW: 23642.2 Da PI: 8.2124

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
BGIOSGA012525-PA	genome	RIS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	64.4	1.9e-20	33	94	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 +Dg++WrKYG K++++ +fpr YYrCt++ +Cp++k++++++ +dp + +tY +eH+++ BGIOSGA012525-PA 33 NDGHQWRKYGEKKINNCNFPRYYYRCTYKdnmNCPATKQIQQKDySDPPLYSVTYYNEHTCN 94 8*************************99999***976538************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	5.3E-23	20	94	IPR003657	WRKY domain
SuperFamily	SSF118290	6.54E-22	26	94	IPR003657	WRKY domain
PROSITE profile	PS50811	15.686	27	96	IPR003657	WRKY domain
SMART	SM00774	7.8E-31	32	95	IPR003657	WRKY domain
Pfam	PF03106	6.3E-24	33	93	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence Send to blast
MSPVPSPHQS HHLGHGSRKE KRMRKVDTFA PHNDGHQWRK YGEKKINNCN FPRYYYRCTY 60 KDNMNCPATK QIQQKDYSDP PLYSVTYYNE HTCNSAFLPL SPSEFQLQTA SGKAVSICFE 120 SSGAQEPMTN ASSPSSSAAR RSTPSENKNQ PLPRHSEAYS WGVGVVEQKP SCTELQSCST 180 ECQDAFSAGT IPEETVDAGR FGSIRFFHFL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6ir8_A	4e-14	33	93	9	68	OsWRKY45
Search in ModeBase

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Os.33131	0.0	callus\| flower\| leaf\| stem

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK101653	0.0	AK101653.1 Oryza sativa Japonica Group cDNA clone:J033057D07, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015631650.1	1e-159	probable WRKY transcription factor 35
TrEMBL	A0A0D3FHV5	1e-157	A0A0D3FHV5_9ORYZ; Uncharacterized protein
TrEMBL	A0A0D9Z6J2	1e-157	A0A0D9Z6J2_9ORYZ; Uncharacterized protein
TrEMBL	A0A0E0GLP9	1e-157	A0A0E0GLP9_ORYNI; Uncharacterized protein
TrEMBL	A0A0E0KD32	1e-157	A0A0E0KD32_ORYPU; Uncharacterized protein
TrEMBL	A0A0E0NUC3	1e-157	A0A0E0NUC3_ORYRU; Uncharacterized protein
TrEMBL	A2XG48	1e-157	A2XG48_ORYSI; Uncharacterized protein
TrEMBL	I1PAT8	1e-157	I1PAT8_ORYGL; Uncharacterized protein
TrEMBL	Q10M65	1e-157	Q10M65_ORYSJ; Os03g0321700 protein
STRING	OGLUM03G15660.1	1e-158	(Oryza glumipatula)
STRING	ORUFI03G16080.1	1e-158	(Oryza rufipogon)
STRING	OS03T0321700-01	1e-158	(Oryza sativa)
STRING	ONIVA03G16490.3	1e-158	(Oryza nivara)
STRING	OPUNC03G15030.5	1e-158	(Oryza punctata)
STRING	ORGLA03G0148400.1	1e-158	(Oryza glaberrima)
STRING	OBART03G15470.1	1e-158	(Oryza barthii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2032	35	100

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	7e-19	WRKY DNA-binding protein 46