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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
BGIOSGA012273-PA |
| Common Name | OsI_10846 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
GRAS |
| Protein Properties |
Length: 579aa MW: 61186.6 Da PI: 4.9153 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA012273-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 296.6 | 6.4e-91 | 132 | 529 | 1 | 373 |
GRAS 1 lvelLlecAeavss..gdlelaqalLarlselaspdgd......pmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklf 84
l +lL+++Aea+s ++ ela+ +L rl+e++s ++ +m+Rlaa+ft AL+ l +s + + ++ ++++++ ++l+a++++
BGIOSGA012273-PA 132 LLHLLMAAAEALSGphKSRELARVILVRLKEMVSHTAGanaaatNMERLAAHFTDALQGLLDGSHPVGGSGRQAAAAASHHhAGDVLTAFQML 224
579**********8557777************6655433455559******************888777766555554444499********* PP
GRAS 85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvp 175
+++sP++kf+h+taNqaIleav+g++rvHi+D+di +G+QW++L+qa++sR+ ++p+lRiT+v+++ g +++++e g+rL+ fA+++g p
BGIOSGA012273-PA 225 QDMSPYMKFGHFTANQAILEAVSGDRRVHIVDYDIAEGIQWASLMQAMTSRAdgVPAPHLRITAVSRSGGGGARAVQEAGRRLSAFAASIGQP 317
****************************************************666789*********7777********************** PP
GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnse................ 251
f+f ++ e +++ + r+ +gEal+ n+vl+ ++L+ + l +k+v+vve+e + ++
BGIOSGA012273-PA 318 FSFGQCRLDSDERFRPATVRMVKGEALVANCVLHQAAATTTIRRP-TgSVASFLSGMAALGAKLVTVVEEEGEAEKDddgdsagdaaaaaaag 409
*****9999***********************9655554333333.247889*******************98866568999*********** PP
GRAS 252 sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
F++rf+e l+ ysa+ dslea++p++s+ r vEr++l+++i +v+ + + + e W ++++ +GF++vpls ++ +qa+lll +
BGIOSGA012273-PA 410 GFVRRFMEELHRYSAVWDSLEAGFPTQSRVRGLVERVILAPNIAGAVSRAYRG--VDGEGRCGWGQWMRGSGFTAVPLSCFNHSQARLLLGLF 500
************************************************99887..88899999****************************** PP
GRAS 345 ksdgyrveee.sgslvlgWkdrpLvsvSaW 373
+ dgy+vee + +vlgWk r+L+s+S+W
BGIOSGA012273-PA 501 N-DGYTVEETgPNKIVLGWKARRLMSASVW 529
*.******99457788************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 579 aa
Download sequence Send
to blast |
MEVTMEDVAG DFEFSGCGST TTTSSASSLD DGTGMCYAWG ELSPVADWAN FCCSDDDGGH 60
DLHGLIESML CDDTLVVVDD DGQAGLHHAD MFRDDLYCYG NGSNPSSTTT TNPGSPVFDD 120
PTQGCPEKGL RLLHLLMAAA EALSGPHKSR ELARVILVRL KEMVSHTAGA NAAATNMERL 180
AAHFTDALQG LLDGSHPVGG SGRQAAAAAS HHHAGDVLTA FQMLQDMSPY MKFGHFTANQ 240
AILEAVSGDR RVHIVDYDIA EGIQWASLMQ AMTSRADGVP APHLRITAVS RSGGGGARAV 300
QEAGRRLSAF AASIGQPFSF GQCRLDSDER FRPATVRMVK GEALVANCVL HQAAATTTIR 360
RPTGSVASFL SGMAALGAKL VTVVEEEGEA EKDDDGDSAG DAAAAAAAGG FVRRFMEELH 420
RYSAVWDSLE AGFPTQSRVR GLVERVILAP NIAGAVSRAY RGVDGEGRCG WGQWMRGSGF 480
TAVPLSCFNH SQARLLLGLF NDGYTVEETG PNKIVLGWKA RRLMSASVWA PPPLPVPSSP 540
PEGVCQPVVG MAPVATGGFA RTEFDYIDSF LVEPAYALV
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots and leaves. {ECO:0000269|PubMed:15961668}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012611 | 0.0 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
