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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA011665-PA |
| Common Name | OsI_09637 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
GRAS |
| Protein Properties |
Length: 500aa MW: 54291.6 Da PI: 6.5326 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA011665-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 254 | 5.6e-78 | 129 | 499 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLar..lsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevs 88
ve+L+++A+ ++gd +a+++Lar ++ + ++++ p+ R a yf+ AL++ l + + +++ pp + +e + +l+a+k fs++s
BGIOSGA011665-PA 129 VEQLVQAAKLTEAGDVLAARHILARpaINYRlPASAAPPLLRSALYFKDALRRALISDDDDSSSSTPPPPLHEPHphdLLLKLTAYKSFSDLS 221
689*********************85466656777889******************9777777777665555444444899999********* PP
GRAS 89 PilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfe 177
P+l f+h+t+ qa+l++++ + +++H +Dfdi+ G QW++L++ La R + l++T+++ +s+ + +l+ +++ L+ fA+ l vpf+
BGIOSGA011665-PA 222 PLLHFAHFTCVQAVLDELSPSaSCIHLLDFDIGVGEQWASLMHDLAHRH-PGVALKVTALNVTASSsshHPLQLQLIHDTLSTFAADLSVPFR 313
******************998799************************6.44799***998876666668899******************** PP
GRAS 178 fnvlvakrledleleeL.rvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
f ++ +l++ +l L +v +a+aV+l + + + ++vL+lv++l +k+vv v++ +d+++ +F++++l+al+ ++l+
BGIOSGA011665-PA 314 FAAF---NLDATDLTPLlAVAAaTDAIAVHLPVGSVHAT----A----VPSVLHLVRRLGAKLVVSVDRGCDRGELPFAAHLLQALRSTVSLL 395
***7...5555555554255557*********9888887....4....456****************************************** PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
+sl+a +++s+ ++k+Er++++++i+++v ++ +++ ++ Wr+ l +aGF pv++s+ a++qa++ll+k +++g+r+e + gsl+l
BGIOSGA011665-PA 396 ESLDAM-GTDSDVAAKIERFWVQPKIQECVRAAVGV-GGDKTAASAWRATLASAGFVPVQVSSMAEAQAESLLKKLPVRGFRLERRAGSLFLH 486
***998.99*********************988776.6888899************************************************* PP
GRAS 362 WkdrpLvsvSaWr 374
W++ +L svSaWr
BGIOSGA011665-PA 487 WQRGELASVSAWR 499
************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MWGWGREHCS LPALEREKRE GEIELVDVWG PSSSSFTLTS PGLRPPTHAA STPPPPPWLD 60
DADHHHDNAF LHWVINDHHH PLLDLDDVDL DYAKPAPFFF ADRGLHHHHP ASSSFPNPKP 120
TADDNTSTVE QLVQAAKLTE AGDVLAARHI LARPAINYRL PASAAPPLLR SALYFKDALR 180
RALISDDDDS SSSTPPPPLH EPHPHDLLLK LTAYKSFSDL SPLLHFAHFT CVQAVLDELS 240
PSASCIHLLD FDIGVGEQWA SLMHDLAHRH PGVALKVTAL NVTASSSSHH PLQLQLIHDT 300
LSTFAADLSV PFRFAAFNLD ATDLTPLLAV AAATDAIAVH LPVGSVHATA VPSVLHLVRR 360
LGAKLVVSVD RGCDRGELPF AAHLLQALRS TVSLLESLDA MGTDSDVAAK IERFWVQPKI 420
QECVRAAVGV GGDKTAASAW RATLASAGFV PVQVSSMAEA QAESLLKKLP VRGFRLERRA 480
GSLFLHWQRG ELASVSAWRC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012611 | 0.0 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
