 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA009764-PA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
Dof |
| Protein Properties |
Length: 349aa MW: 35653.2 Da PI: 9.803 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA009764-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 121 | 4.3e-38 | 66 | 123 | 3 | 60 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
++ l+cprC+s+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk +
BGIOSGA009764-PA 66 QAPLRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRP 123
66789**************************************************875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MDQLKGASAL NHASLPVVLQ PIVSNPSPTS SSSTSSRSSA QATQQRSSSA TSSPHGQGQG 60
GGAAEQAPLR CPRCNSSNTK FCYYNNYNLT QPRHFCKTCR RYWTKGGALR NVPIGGGCRK 120
PRPMPAPVAK PPMSCKAAPP LGLGGGPVSW ASGQQAATAH LMALLNSARG VQGHGGSNVH 180
RLLGLDTMGH LQILPGAPNG AGAGTAASLW PQSAPRPVTP PPPHMDSQLG MGTLGHHDVL 240
SSLGLKLPSS ASSSPAASYY SDQLHAVVSN AGRPQAPYDV ATASLPCTTA VTSLPSALSS 300
VSAAAPTSNT VGMDLPPVSL AAPEMQYWNG PAAMSVPWPD LPTPNGAFP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC099043 | 0.0 | AC099043.6 Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence. |
| GenBank | AK063380 | 0.0 | AK063380.1 Oryza sativa Japonica Group cDNA clone:001-114-F11, full insert sequence. |
| GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
