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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA002172-PA | ||||||||
Common Name | OsI_00807 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | BES1 | ||||||||
Protein Properties | Length: 334aa MW: 35662.9 Da PI: 8.6842 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 205.3 | 1.8e-63 | 1 | 144 | 6 | 150 |
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 +ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+e++e++g+s s sp+ss+q BGIOSGA002172-PA 1 MPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGYKPPERMEVIGCSVSPSPCSSYQ--- 90 69****************************************************************************************... PP DUF822 99 kssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsssl 150 +sp++sy+asp+sssfps +s+ ++++ ++ + +lp+l++ls+++ss+ BGIOSGA002172-PA 91 -----PSPRASYNASPTSSSFPSGASSPFLPHPNNmangvdgNPILPWLKTLSNSPSSK 144 .....99*******************999999988999999999********9999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.6E-63 | 1 | 138 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence Send to blast |
MPTWRERENN KRRERRRRAI AAKIFAGLRA HGGYKLPKHC DNNEVLKALC NEAGWVVEPD 60 GTTYRKGYKP PERMEVIGCS VSPSPCSSYQ PSPRASYNAS PTSSSFPSGA SSPFLPHPNN 120 MANGVDGNPI LPWLKTLSNS PSSKKHPQLP PLLIHGGSIS APVTPPLSSP TARTPRMKTD 180 WDESNVQPTW TGSNSPCVVN STPPSPGRTM LPDPAWLAGI QISSTSPSSP TFSLVSSNPF 240 SVFKDAIPVG NNSSRMCTPG QSGTCSPAIP GMAPHPDIHM MDAVSDEFAF GSSTNGGHQA 300 AGLVRAWEGE RIHEDSGSDD LELTLGSSRT RAAA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-21 | 2 | 70 | 374 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-21 | 2 | 70 | 374 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-21 | 2 | 70 | 374 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-21 | 2 | 70 | 374 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.1302 | 0.0 | callus| flower| leaf| panicle| root| seed| stem |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32977489 | 0.0 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK067471 | 0.0 | AK067471.1 Oryza sativa Japonica Group cDNA clone:J013107L10, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015622415.1 | 0.0 | protein BZR1 homolog 2 | ||||
Swissprot | Q0JPT4 | 0.0 | BZR2_ORYSJ; Protein BZR1 homolog 2 | ||||
TrEMBL | B8A6K9 | 0.0 | B8A6K9_ORYSI; Uncharacterized protein | ||||
STRING | ORUFI01G07130.2 | 0.0 | (Oryza rufipogon) | ||||
STRING | OS01T0203000-01 | 0.0 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 5e-82 | BES1/BZR1 homolog 4 |
Publications ? help Back to Top | |||
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