 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
BGIOSGA000383-PA |
| Common Name | OsI_04673 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
GRAS |
| Protein Properties |
Length: 349aa MW: 38427.2 Da PI: 4.2518 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA000383-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 244.8 | 3.4e-75 | 123 | 349 | 2 | 230 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
++lL++cA+a+s+ + +aqa+++ l++++s +gdp qR+aay++e+Laar++ s++++ykal+++e + + +l+a+++++e++P+++f+
BGIOSGA000383-PA 123 KQLLFDCATALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGKGIYKALSCKEPP---TLYQLSAMQILFEICPCFRFG 212
589*****************************************************************9...89999**************** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
+++aN aIlea +ge+rvHiiDfdi+qG Q+++L+q L + +++p +lRiTgv++pe++ l+ +g+rL+k+Ae +g++fef++ v +
BGIOSGA000383-PA 213 FMAANYAILEACKGEDRVHIIDFDINQGSQYITLIQFLKNNANKPRHLRITGVDDPETVqrTVGGLKVIGQRLEKLAEDCGISFEFRA-VGAN 304
*********************************************************99778889***********************.799* PP
GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLkl 230
+ d+++ +L+++pgEal+Vn+++qlh+l+desvs+ +erd++L++
BGIOSGA000383-PA 305 IGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRM 349
******************************************985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MPYMVTADGH SPSSADNSCS DVAKDSPLVS NVSQQNSQSI SDNQSSELEV EFDEDDIRMK 60
LQELEHALLD DSDDILYEIS QAGSINDEWA DPMKNVILPN SPKESESSIS CAGSNNGEPR 120
TPKQLLFDCA TALSDYNVDE AQAIITDLRQ MVSIQGDPSQ RIAAYLVEGL AARIVASGKG 180
IYKALSCKEP PTLYQLSAMQ ILFEICPCFR FGFMAANYAI LEACKGEDRV HIIDFDINQG 240
SQYITLIQFL KNNANKPRHL RITGVDDPET VQRTVGGLKV IGQRLEKLAE DCGISFEFRA 300
VGANIGDVTP AMLDCRPGEA LVVNFAFQLH HLPDESVSIM NERDQLLRM
|
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Os.9902 | 0.0 | callus| flower| leaf| panicle| root| seed| stem |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
