PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.YT7PR

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 151aa MW: 16457.6 Da PI: 4.2967

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.YT7PR	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13	0.00019	12	43	24	54
HCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 24 rellPk.askapskKlsKaeiLekAveYIksL 54 +++l + +++++s ++Ka+i A++YI +L Araip.YT7PR 12 QRMLQQlRTATNSSAMNKASIIVDATKYIEEL 43 444444333467777**************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	2.8E-5	9	47	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd04873	2.24E-5	91	147	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence Send to blast
MSSRGRKKAA MQRMLQQLRT ATNSSAMNKA SIIVDATKYI EELKQKVEGI NSELGTVGSS 60 SSTSQDELPM VTVETLERGF LINVFSERNC PGMLVAILEA FEELGLDVLD ARVSCEDNFQ 120 LEAVGGEGQD QESIDAQVVK QAVLQAINNM N

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.YT7PR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016186634.1	1e-106	transcription factor SCREAM2
Refseq	XP_025633928.1	1e-106	transcription factor SCREAM2
TrEMBL	A0A445AL46	1e-105	A0A445AL46_ARAHY; Uncharacterized protein
STRING	XP_007134819.1	4e-86	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF724	10	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12860.1	4e-12	bHLH family protein