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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.W94MZ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 22774.3 Da PI: 6.1285 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.3 | 6.2e-17 | 91 | 149 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r+rr+++NRe+ArrsR RK++ ++eL v L +eN+ L+++l++ ++ ++kl +e+ Araip.W94MZ 91 RRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDQLNRVSESYEKLLQEN 149 79******************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.4E-18 | 87 | 151 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.392 | 89 | 152 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.3E-15 | 91 | 149 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.97E-13 | 91 | 143 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-12 | 91 | 159 | No hit | No description |
CDD | cd14702 | 8.76E-21 | 92 | 142 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 94 | 109 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MVPSEVNNLH NFYLSQENQF LFPPNFTLLQ NDISNINLNT LLTQFPSYYL QHSLGYNSNN 60 SELLVPPSYL SSNSTTSDEA EENQLNIIDE RRQRRMISNR ESARRSRMRK QKHLDELWSQ 120 VVRLRNENHN LIDQLNRVSE SYEKLLQENA CLKEEVSDLR RMFTKLQIAT TTTIFSGGRD 180 EFSNNNSINS RELL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 103 | 110 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.W94MZ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016173391.1 | 1e-138 | basic leucine zipper 43-like | ||||
Refseq | XP_025630949.1 | 1e-138 | basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 2e-36 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A445EUP6 | 1e-134 | A0A445EUP6_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA02G13960.2 | 3e-71 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1604 | 33 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 9e-45 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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