 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Araip.VC558 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
Nin-like |
| Protein Properties |
Length: 329aa MW: 37987.6 Da PI: 6.6739 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Araip.VC558 | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 79.8 | 2.8e-25 | 205 | 254 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
++i l dl kyF+ pi +A+++L+++lTvLKr+CR++GI+RWPhRkiksl
Araip.VC558 205 AKIALPDLVKYFDVPIVEASRNLNIGLTVLKRKCREFGIPRWPHRKIKSL 254
7899********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MDSSLSILLV FNNTIQPELF RSVHVYCREL LDGDEREEEE VVVEREFVLS ESGFYVEMKC 60
TPILTSLKLC VDDVCEGYKN GVWLCVFAFH ADHTPQFTHI PSILLFARNS KLKAIPNLLN 120
DLQIIYKLEL KAEVKDDLPD SSKEESQGNS DGHQSPQKVL PVFNQDLNCL PLDEDTTELI 180
DKKTNVESLP GFGAKKRRAQ SDHIAKIALP DLVKYFDVPI VEASRNLNIG LTVLKRKCRE 240
FGIPRWPHRK IKSLDNLIHD LEEEAKHQEP KDKVAAMAMV RRQRMLECEK ENMEKKPFMD 300
IQTETKRFRQ DVFKRRHRAR AVEKQSSAV
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 2e-50 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
