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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.UT46I | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 544aa MW: 60759.1 Da PI: 5.7993 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.9 | 1.8e-13 | 349 | 395 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E++RR+++N ++ Lr+l+P++ +K++ a+++ A+eYI++L Araip.UT46I 349 TKHFATEKQRREQLNGKYKILRSLIPSP-----TKMDRASVVGDAIEYIREL 395 78**************************.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.167 | 346 | 395 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.76E-15 | 347 | 413 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.3E-11 | 349 | 395 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.9E-12 | 349 | 399 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.96E-12 | 349 | 399 | No hit | No description |
SMART | SM00353 | 1.0E-11 | 352 | 401 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0048658 | Biological Process | anther wall tapetum development | ||||
GO:0052543 | Biological Process | callose deposition in cell wall | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 544 aa Download sequence Send to blast |
STTILPTSLP IPCPPETTHL QYYLGYFTFY YCRQKPMSCG DRPNMHEQPG CFDPNTMAEG 60 VSTPKLKDTF PQTLSDPSSS PSPLIVVGNT TNSNNNLEEN IRLSMEELSY HHQQEDVSNY 120 VNGVTATTID IPHPQHLGLN MGNSYNNNIN MDSHLVQHEI DILPYQQPTW DPNVQEMQDM 180 GYTNHSEHQP HDQQFQQTEA QNCSQSYNPS SILDPPYPSQ DLLNLLHLPR CSTSSLLANP 240 AICIANKTQN FQNPMGFLGD LPIGSDNTSA SSVLYDPLLH LNLPPQPPAL RELFQSLPRG 300 YSLPTNSRSG SLFGGGDEIE GDGSQLDMGV LDFNRVTASV GKGREGKGTK HFATEKQRRE 360 QLNGKYKILR SLIPSPTKMD RASVVGDAIE YIRELLRTVN ELKLLVEKKR YGRERCKRQK 420 AEDDAAESCN IKPFSDPDGC IRTSWLQRKS KDSEVDVRIV DDDVTIKLFQ RKKINCLLSV 480 AKVLDELQLE LHHVAGGHVG EYCSFLFNSK IIEGSSVYAS AIANRVIDVM DTQYAAAVPH 540 TSSY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.UT46I |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020975605.1 | 0.0 | transcription factor bHLH91 isoform X1 | ||||
Refseq | XP_025639842.1 | 0.0 | transcription factor bHLH91-like isoform X1 | ||||
Refseq | XP_025691456.1 | 0.0 | transcription factor bHLH91 isoform X1 | ||||
TrEMBL | A0A445DM17 | 0.0 | A0A445DM17_ARAHY; Uncharacterized protein | ||||
STRING | XP_007163873.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3743 | 32 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 8e-65 | bHLH family protein |