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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.UNH79 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 195aa MW: 22661.5 Da PI: 5.3817 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 68.9 | 1.2e-21 | 63 | 152 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++YA GF vr ++ k+ +g++++r+ vC++ g+r+e kk+e+ r +r+ tr C a+++ ++++ ++w+v ++ +eH+Hel+ Araip.UNH79 63 RFYKTYAMIHGFAVRLDEVKRD-SDGSVIMRQIVCNRAGSRKEMVKKDERIRDHRPLTRSCCPARIRARLDTkIQQWKVVSFYEEHSHELV 152 5****************99887.8999********************9***********************989***************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 9.4E-19 | 63 | 152 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence Send to blast |
MYPSDSDFFG SDSDVGFPRG DDLDFLDDDS EADEDRPQDK RIAELSREDI MQLQFTDEEA 60 VYRFYKTYAM IHGFAVRLDE VKRDSDGSVI MRQIVCNRAG SRKEMVKKDE RIRDHRPLTR 120 SCCPARIRAR LDTKIQQWKV VSFYEEHSHE LVAPLDVSMM PEYRTFSVSD KAQAKNLHDI 180 GIRTCHILGY LAAQK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.UNH79 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025628429.1 | 1e-138 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A445AUB0 | 1e-137 | A0A445AUB0_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17158 | 2 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 1e-14 | FAR1-related sequence 11 |