PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.TXT1L
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 332aa    MW: 38271.4 Da    PI: 8.5601
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.TXT1LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.12e-2064157189
         FAR1   1 kfYneYAkevGFsvrksks...kkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  ++YneY++  GF vr+sk    +k+  +gei+++ fvCs+eg+r  ++ + ++++  +r+ tr+gC+a++kv+ ++ + +w v+++  +HnH++
  Araip.TXT1L  64 DYYNEYGRIKGFLVRRSKVgcrTKQGAEGEIIWQIFVCSREGERYGKHMQrEDRKMDPRPITRCGCEARIKVHVDDaSRRWFVEQFFDNHNHPM 157
                  69**************9862214557899**************998887745677779******************9***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.1E-1864158IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MSGETVPVEE AEAMDSSVVD ADIDGEAAVR IVDGIGSFGA IEFSSLIAKD VLTTKFTSLQ  60
EAYDYYNEYG RIKGFLVRRS KVGCRTKQGA EGEIIWQIFV CSREGERYGK HMQREDRKMD  120
PRPITRCGCE ARIKVHVDDA SRRWFVEQFF DNHNHPMLDA RFRGLSRSHR AVKEGDLHQI  180
NSMRKSGMRV PTIFGAFANQ SGGFETVGIW TDSVEKHGLE DHPWIADMYA KKRSWSNAHI  240
RGKFFAGLKT TSRCEALNMQ LGKFIHNGYN LREFVEHFQH YLEFMRRREL VADYKFAYGE  300
PVVKMKLEAI EQFAASLRRF IQERSSNYFG RC
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.TXT1L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172821.11e-152protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444X0R91e-129A0A444X0R9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-17FAR1-related sequence 5