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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.TM757 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 212aa MW: 25005.6 Da PI: 6.2604 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 70.1 | 3.2e-22 | 19 | 79 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ +s++ r+YYrC+++ gCp+ k+v+r +e+p + +tY g+H+++ Araip.TM757 19 EDGHAWRKYGQKKTMNSKYLRNYYRCSHKcdeGCPAMKQVQRIQENPPLYRTTYYGHHTCK 79 8***************************9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 19.267 | 13 | 76 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-22 | 15 | 79 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 4.6E-24 | 16 | 80 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.1E-32 | 18 | 80 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.6E-22 | 19 | 79 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MLIRTTAPTW EKDNPILLED GHAWRKYGQK KTMNSKYLRN YYRCSHKCDE GCPAMKQVQR 60 IQENPPLYRT TYYGHHTCKN TNYYNNEESI ILEHESKSSM FLSFNNNNNN IIPSSKKQIL 120 RSTKQEAVEL VIHDHHDDHS VATHQSQLYD HYEVDLEYSR HVAMLSSSSS PSCTDDTTVH 180 QFDNNYYYDF GWDLDFDGMA CFDHQDQITM II |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 1e-19 | 18 | 79 | 8 | 69 | OsWRKY45 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.TM757 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016168364.1 | 1e-158 | probable WRKY transcription factor 62 | ||||
Refseq | XP_025672697.1 | 1e-158 | WRKY DNA-binding transcription factor 70-like | ||||
TrEMBL | A0A444Y3K2 | 1e-156 | A0A444Y3K2_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA13G34251.1 | 3e-51 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12638 | 11 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 9e-23 | WRKY DNA-binding protein 38 |