PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.S4VE0
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 318aa    MW: 33595.8 Da    PI: 5.996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.S4VE0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.17e-22213275163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l se+
  Araip.S4VE0 213 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLASEN 275
                  89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.0E-7127IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.7E-4666185No hitNo description
Gene3DG3DSA:1.20.5.1707.4E-18206273No hitNo description
SMARTSM003382.1E-22213277IPR004827Basic-leucine zipper domain
PfamPF001703.7E-20213275IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.564215278IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.56E-11216272No hitNo description
CDDcd147024.55E-22218268No hitNo description
PROSITE patternPS000360220235IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MPPYGTPTHP YVAMYPHGGI YAHPSMPPGS YPFSPFPMPS PNGIAEASGN TPGSMEADGK  60
PPEVKEKLPI KRSKGSLGSL NMITGKNNEP GKTGTSANGI HSKSGESASE GSSEGSDANS  120
QNESQLKSGG RQDSYEDEPS QNGSSAHAPQ NGGINTPHAV VNQTMSVIPI TAAGVPGAVP  180
GPTTKVPSTA VAGGMVAAGS RDSVQSQLWL QDERELKRQR RKQSNRESAR RSRLRKQAEC  240
DELAQRAEAL KEENASLRSE VSRIRSEYEQ LASENAALKE RLGELPGNDD LRSRTMNDQP  300
AADDPQQSGQ AEAVEGGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229235RRSRLRK
2229236RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.S4VE0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3697911e-161AF369791.1 Phaseolus vulgaris bZIP transcription factor 3 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201175.10.0bZIP transcription factor 16 isoform X1
RefseqXP_016201176.10.0bZIP transcription factor 16 isoform X1
RefseqXP_016201177.10.0bZIP transcription factor 16 isoform X1
RefseqXP_016201178.10.0bZIP transcription factor 16 isoform X1
RefseqXP_016201180.10.0bZIP transcription factor 16 isoform X1
RefseqXP_016201181.10.0bZIP transcription factor 16 isoform X1
RefseqXP_020978423.10.0bZIP transcription factor 16 isoform X1
SwissprotQ501B21e-123BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A444WVI30.0A0A444WVI3_ARAHY; Uncharacterized protein
STRINGGLYMA01G01740.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-98basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]