|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Araip.S159U |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
Family |
TALE |
Protein Properties |
Length: 643aa MW: 71399 Da PI: 6.2562 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.S159U | genome | NCGR_PGC | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 28.8 | 2.2e-09 | 393 | 430 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ +e+ LA+++gLt +qV +WF N R +
Araip.S159U 393 FEHflHPYPKDSEKIMLARQTGLTRNQVANWFINARVR 430
665559******************************88 PP
|
2 | BELL | 124.4 | 4.5e-40 | 264 | 335 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
+rq+l kk+kLl +l+eVdkrY+qy++q+q+v+ssF++vag+g+a+pYt+lAl++iSrhFrcL+dai++qi
Araip.S159U 264 DRQNLLDKKTKLLAMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQI 335
5788999****************************************************************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 643 aa
Download sequence Send
to blast |
MYQNQAFPSG SYEEMLSGNS LLTHHNYGDS VGGGGHNNEL KFITSLGESM TMQPLEEHSN 60 AAATGDPSCN SFGDQNIQCQ GLSLSLGSVM PSIATSMPHH FQYPQYHNSS FTSLMNAMPN 120 LKGNNGSSLK DDEVRNTECM TPPMSSGGFY NSIKREGLYN NTNHPSMCLS EGQVDPGLHG 180 SAGFSSSTAL NSQYLKAAQE LLDEIVNVRK ALKQPGLEKQ QSFRDAGLDG SKDSDGKSNS 240 QSMQVSSGAN GSAVNSSTEL SPADRQNLLD KKTKLLAMLD EVDKRYRQYC HQMQIVVSSF 300 DMVAGCGAAE PYTALALRTI SRHFRCLRDA ISGQIQVTQR SLGEQEGIPR LRYVDQQLRQ 360 QKALQQLGVM RQAWRPQRGL PESSVSILRA WLFEHFLHPY PKDSEKIMLA RQTGLTRNQV 420 ANWFINARVR LWKPMVEEMY KEEFGDSEMS CNLLSENSIP KASRDDVQVS DNNKREESQE 480 NLAAVDDSVQ HGIQSSDYGE NLMDSSSSRT SRKLQQCDQR FNMKNTPFSN ASTIQINHHN 540 GHDDGNGCLA STHATYDYSA LGNFAAVGGH VSLALELRNR ESNGLGMSND DEIHNKRSSN 600 QTLASSSEND LLDYHLTEQE KQQQQQQHKF GNPQQRLLHE FVV
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor that is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:16513846}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT136990 | 5e-96 | BT136990.1 Lotus japonicus clone JCVI-FLLj-16H21 unknown mRNA. |