 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Araip.RX5RL |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
Family |
MYB_related |
Protein Properties |
Length: 596aa MW: 66751.1 Da PI: 9.5259 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.RX5RL | genome | NCGR_PGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.3 | 7.2e-08 | 504 | 553 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
r +++ E e lv+av++lG+g+W+ + ++ k+Rt ++k++w ++
Araip.RX5RL 504 RRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFdhaKHRTYVDLKDKWKTL 553
567888999**********************99**************986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 596 aa
Download sequence Send
to blast |
MVLHKRLNYS FDGYHVPVIP RASRSVRGRG SIRKKRDNSH IHAFEILASV AGNFLHANES 60 SNPENTSFAK EADLFHGNNV KEKENDETGL FKGDLFTHGT CSKITTTCVP SLQGEHDNQS 120 HIEGQGQNVL EREDGGMKRR NSNEKIIHIK GSYVGVNEPG HKVFKDCTLE NNVEKPLPEC 180 RNHLDSSHGG SIARKLVNTD NDENFARCTQ SNLRNKISSP PLDTPKLKDA SPIASDENNS 240 RDNSELENLQ RMYPFKKRKF FNQTSSSTSD RGSQCQGVFD FSDSKVNSTI HGTGIEESSS 300 IAGQQVHPGS KGCNVKLSIK SFKVPELFID IPETATIGSL KRTVMEAVTT ILGDELHIGI 360 LLQGKKIRDD NKTLIQTGIC QDDKRHRLGF MLEPRHTRIS SPSYNEDPCY LTSSPQQKLS 420 RQSTSLMFQQ GTYNVSQERS LIKIESCAEG DLKLSSSVAD TSANNNMSKC RALVAVPAIN 480 MQALAVVPLR RKSGNPDFGQ RRIRRPFSVL EVEALVQAVE KLGTGRWRDV KQRAFDHAKH 540 RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLAA HAYWSQQQCK HQLKPL
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 249 | 258 | QRMYPFKKRK |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP006362 | 1e-96 | AP006362.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT34B12, TM0147a, complete sequence. |