PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.RX20Z
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 202aa    MW: 22985.3 Da    PI: 7.7408
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.RX20ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.9e-101666455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                   +++Er+RR+++++  ++L +llP+ +   p++  +  ++   +A+ YIk L+
  Araip.RX20Z 16 ERKIIERNRREQMKNLCFKLNSLLPNfN---PKQTlPPRVDQIDEAIIYIKTLE 66
                 6789**********************88...77777***************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.39E-51070No hitNo description
SuperFamilySSF474595.76E-111282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.8081265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-91480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.2E-71666IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00241871IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MAHQQRGQAS SSTKMERKII ERNRREQMKN LCFKLNSLLP NFNPKQTLPP RVDQIDEAII  60
YIKTLESRVE IAKEKKESLL NKGMKKRPHD LAGSSAFDDE TQGTSLKPPT IEIHERGSML  120
EIVLMISGFD NQFIFSEIIR ILHEENIEVL SAISSRAGDS MIHVVHAENH LYQLGATKEI  180
SERLKRFVDA HCLQDIQGAQ GP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.RX20Z
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020963725.11e-148transcription factor bHLH162-like
RefseqXP_025672789.11e-148transcription factor bHLH162
TrEMBLA0A444Y6531e-147A0A444Y653_ARAHY; Uncharacterized protein
STRINGGLYMA06G44660.29e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-27bHLH family protein