PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.RPQ9U
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 400aa    MW: 43111.9 Da    PI: 6.5801
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.RPQ9UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.85.3e-09228276553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  kr++r   NR +A rs +RK  +i+eLe++v++L++e ++L  +l  l+
  Araip.RPQ9U 228 KRAKRIWANRQSAARSKERKMRYIAELEKRVQTLQTEATSLSAQLTILQ 276
                  9****************************************99887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-15224288IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.703226289IPR004827Basic-leucine zipper domain
PfamPF001703.0E-8228277IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.73E-11228278No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-10228280No hitNo description
CDDcd147035.05E-24229278No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MDKDKSPGHG GGFPPSSGRF SGFSASAAPF NVKSELPSSS ALLPPLPVPA ATSDSASFSH  60
DISRMPDNPP RNRGHRRAHS EILTLPDDIS FENDLGIVGG CADGPSFSDD TEEDLLSMYL  120
DMDKFNLPAA TGEFGIGETS IGGAATAAAV ALSSALASGA AAASSEDNTA VGTNGRPRVR  180
HQHSQSMDGS TTIKPEILVS GLEEASAVDS KKAISAAKLA ELALIDPKRA KRIWANRQSA  240
ARSKERKMRY IAELEKRVQT LQTEATSLSA QLTILQRDTG GLNAENNELK VRVQSMEQQV  300
HLQDALNDAL KEEIQHLRVL TGQALPNGGA PMNFASSVGG EQQFQSKNQS MHTILAAQQL  360
QQLQIRSRKQ QHQQQLFQNH QPQHLQQFQQ PQPPQQQQEH
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.RPQ9U
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016187116.10.0probable transcription factor PosF21
RefseqXP_025642175.10.0probable transcription factor PosF21
SwissprotQ040881e-143POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A445A9A40.0A0A445A9A4_ARAHY; Uncharacterized protein
STRINGXP_008222595.10.0(Prunus mume)
STRINGEMJ235790.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-145bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]