PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.RF2IV
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family EIL
Protein Properties Length: 507aa    MW: 57214.8 Da    PI: 4.6891
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.RF2IVgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3399.25.2e-122373881353
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  e+lkkr wkd++ll+++k  +k ++   e  +++  ++  +e++r+kkmsraQD++LkYM+k+mevc+a+GfvYgi+pekgkpv+g+sdsLr+WWke+
  Araip.RF2IV  37 ENLKKRIWKDRILLQKMK--EKLNM--DE--FEN--KEAKQEASRKKKMSRAQDSVLKYMVKIMEVCKARGFVYGIVPEKGKPVTGSSDSLREWWKEN 126
                  789************554..44445..22..233..34679********************************************************* PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT--.--- CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppy 195
                  ++fd+++p+ai+ky +   +l++++    ++ss+ h l++lqDTtlgSLLsalmqhc ppqrr+pl+kgv+pPWWP+G+e+wwge+g l+++ g+ppy
  Araip.RF2IV 127 IRFDQTAPTAIAKYLP---LLEKGEL---DESSSIHLLQDLQDTTLGSLLSALMQHCVPPQRRYPLDKGVAPPWWPNGSEAWWGEQGlLAQENGPPPY 218
                  **************33...4554444...489*******************************************************9999999**** PP

                  --GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX. CS
         EIN3 196 kkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrkqspkvtlsceqkedvegkkeski 292
                  kkphdlkkawkvsvL++vikhmsp++e++r+l+ qsk lqd+m+ak+s+++++v+n+ee+ ++      + s+++ s + + +++ + + e+ + s i
  Araip.RF2IV 219 KKPHDLKKAWKVSVLASVIKHMSPNLEKLRRLVTQSKTLQDRMTAKDSATWSKVVNKEEASLRLTNKCLKiSHSSPSDEENNKEDGEGEIEVFESSPI 316
                  ***********************************************************987644444332333333333444444444446666666 PP

                  XXXXXXXXXX.........XXXXXXXXXXXXXXXXXXXXX........XXXXXXX.XXXXXXXXXXXXXXXX CS
         EIN3 293 khvqavktta.........gfpvvrkrkkkpsesakvssk..evsrtcqssqfrgsetelifadknsisqne 353
                  +++++   +          +    +krk ++++++  ++   +  + cq+  +++s+ +l+f+dkns+ ++e
  Araip.RF2IV 317 SSINNSLDHVlfggdggssNNGDSEKRKCNFDSNNNGNNFvdKLLYACQNVDCPQSDLSLGFKDKNSRMDHE 388
                  66655555449*****99844444455544444444433233789***********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.9E-11537277No hitNo description
Gene3DG3DSA:1.10.3180.102.6E-66152281IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.68E-58155279IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MVVIQEEMDP PYVQLSDTED EEIDATATAE DETINYENLK KRIWKDRILL QKMKEKLNMD  60
EFENKEAKQE ASRKKKMSRA QDSVLKYMVK IMEVCKARGF VYGIVPEKGK PVTGSSDSLR  120
EWWKENIRFD QTAPTAIAKY LPLLEKGELD ESSSIHLLQD LQDTTLGSLL SALMQHCVPP  180
QRRYPLDKGV APPWWPNGSE AWWGEQGLLA QENGPPPYKK PHDLKKAWKV SVLASVIKHM  240
SPNLEKLRRL VTQSKTLQDR MTAKDSATWS KVVNKEEASL RLTNKCLKIS HSSPSDEENN  300
KEDGEGEIEV FESSPISSIN NSLDHVLFGG DGGSSNNGDS EKRKCNFDSN NNGNNFVDKL  360
LYACQNVDCP QSDLSLGFKD KNSRMDHESM CAFRGATLNH QESNSSNENS KAFHDYLSSE  420
ERMTSVGDWM NMEVAKANDN NNNNNNFGDT DFGDIDIMNR MEEIAGEAFG EDNLGLWPND  480
IEGCELLAAL EMVRADSVID STHQNNK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A8e-591532811128Protein ETHYLENE INSENSITIVE 3
4zds_B8e-591532811128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.RF2IV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177971.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9FJQ51e-130EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLV7CRS50.0V7CRS5_PHAVU; Uncharacterized protein
STRINGXP_007159632.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-120EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]