PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.QT81S

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 276aa MW: 31977.6 Da PI: 5.2171

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.QT81S	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.7	4.5e-19	96	183	1	87
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 +fY++YAk+vGF +r+++++ ++++ +++ + Cs+eg+re++ k+ + r + t +Cka++ v +++ +++w+v++lel+H+H Araip.QT81S 96 EFYSNYAKKVGFVTRIRNTNFDktrTDSKIPINQLLHCSREGYRESRVKA---ATRVKRITTAECKARMYVMLDRqQDNWMVSTLELKHTH 183 6***********9998876644233444588999*******999...788888999******9998************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.4E-16	96	183	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MHEDHIMSTD QAIYEEASYS TAYDDSDQYN SCDVNVPSIS EDDTQHVDKG KESVNIIQVE 60 DDAMAVNNEL PDHTRIPIDE ISYVGLRFVS LQRAQEFYSN YAKKVGFVTR IRNTNFDKTR 120 TDSKIPINQL LHCSREGYRE SRVKAATRVK RITTAECKAR MYVMLDRQQD NWMVSTLELK 180 HTHLYLYDER QMWVPIYFQG EFWVGMISTQ RSESMHAFFG GYLHCKSGLV QFVHEYDNVL 240 GNKEQKDLED DAADSKGVVP CSSSSTIERQ FQRCIS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.QT81S

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016191883.1	1e-123	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_025637709.1	1e-123	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YDG0	1e-113	A0A444YDG0_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF29282	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-11	FAR1 family protein