PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.QJL2A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 128aa MW: 14440.6 Da PI: 7.3513 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.2 | 1.6e-14 | 48 | 94 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN +++Lr+l+Pk+ K++Ka+ L +v+++k+L Araip.QJL2A 48 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVVDHVKDL 94 79*************************8.....7****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.415 | 45 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.42E-14 | 46 | 98 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.2E-12 | 48 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.19E-10 | 48 | 97 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.0E-16 | 48 | 97 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-11 | 51 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence Send to blast |
MGWKRLWVKL LVEDNLGLLL NDIEDCPGAL EMVKANRFPE DRAASASKSH SQAEKRRRDR 60 INAQLATLRK LIPKSDKMDK AALLGSVVDH VKDLKRKAMD VSKSITVPSE TDEVTIIECD 120 PDQDERLC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.QJL2A |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by salicylic acid (SA) treatment. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015931276.1 | 3e-54 | transcription factor bHLH51 | ||||
Refseq | XP_016167517.1 | 3e-54 | transcription factor bHLH51 | ||||
Refseq | XP_025609140.1 | 3e-54 | transcription factor bHLH51 | ||||
Refseq | XP_025666270.1 | 3e-54 | transcription factor bHLH51 | ||||
Swissprot | Q9XEF0 | 2e-21 | BH051_ARATH; Transcription factor bHLH51 | ||||
TrEMBL | A0A444WZG6 | 1e-67 | A0A444WZG6_ARAHY; Uncharacterized protein | ||||
STRING | XP_009345143.1 | 3e-43 | (Pyrus x bretschneideri) | ||||
STRING | XP_008374114.1 | 3e-43 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF11441 | 28 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 5e-24 | bHLH family protein |
Publications ? help Back to Top | |||
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