 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Araip.QH7DM |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
HB-other |
| Protein Properties |
Length: 219aa MW: 24492.2 Da PI: 10.6866 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Araip.QH7DM | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 21.7 | 3.6e-07 | 46 | 107 | 6 | 55 |
S--HHHHHHHHHHHHHSSS..--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
Homeobox 6 tftkeqleeLeelFeknry..psaeereeLAkkl..........gLterqVkvWFqNrRake 55
+ft+++++e+e+ ++++y p ++ + LA+k ++ +qV +WFqN+R+
Araip.QH7DM 46 RFTPTEVTEMETILQNHNYamPARDVLTALAEKFseslerkgkiTVQMKQVWNWFQNKRYAI 107
6999***********977666999******************99999************865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 219 aa
Download sequence Send
to blast |
VRRKFSTFSE SKHLTFSHSH TLSLPGIPLS ASEMGRPPSN GVPAFRFTPT EVTEMETILQ 60
NHNYAMPARD VLTALAEKFS ESLERKGKIT VQMKQVWNWF QNKRYAIRAK SSKTPGKLNI 120
TPMPRDESTT VRNIPQLTAG PIPTTSGSGY FSMLQGAASL PNIACKYFSI DDHSNKLSSS 180
FIMKHSNQLF RLMIILTILF SNRFSPTSID SLSSLSIVF
|
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G18380.3 | 4e-45 | sequence-specific DNA binding transcription factors;sequence-specific DNA binding |
