PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.PX0QP

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 573aa MW: 63311 Da PI: 4.3311

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.PX0QP	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.5	2.9e-11	1	26	102	127
NAM 102 lkktLvfykgrapkgektdWvmheyr 127 +kktLvfy+grapkg++t+Wvmheyr Araip.PX0QP 1 MKKTLVFYTGRAPKGKRTNWVMHEYR 26 8************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	7.45E-15	1	50	IPR003441	NAC domain
PROSITE profile	PS51005	20.983	1	50	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence Send to blast
MKKTLVFYTG RAPKGKRTNW VMHEYRPTLQ ELDGTNPGQN PYVLCRLFKK QDESLEGSNG 60 EEMERTTSTN LTANYSPEEI QSDPAVKSVS SSQATEDDKK LAVIPLTPEE AISNVITPVG 120 CQNDGCDAYD AQNQIAAGDP SKEEDLQVNM DIFYDPSELF DDKLFSPLHK HIPEELFHQS 180 NNEANGHFGL QHQCGTNEIS ISDFFDSVIN WDEISGDNSS GQTPNSAWFD VQHNESWGNS 240 NVDMVHARPL QVGGADYPGD ATEGKLPLLK TREFNPNTSY DNALSNNMGL FHNHSQMAFS 300 SDVNMLQGYH ATNNYEQPTN FNMAMANSDN TGIRIRSRPP GYEGPNVNSN MQPQGTAPRR 360 IRLARSLAPQ HMSNEAAKDS SYESKDQNSQ LTTAREMETS KDLAAGESVT VTSDVEEQET 420 SPVENKEFED FNTVQQSTSS ASSNLSTCSS DSEVSYEAEK ESGWTSEDHS PKPAAAGASK 480 ASEDQVPSEC VNDITDDVDE PRIPNAYTLE VSKEESFSDS QSKDSLLRRK VCYPSKSSSN 540 LAKWYSVIAV SATLVVLLAF LVNTWGYGYY LKV

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence Send to blast

MKKTLVFYTG RAPKGKRTNW VMHEYRPTLQ ELDGTNPGQN PYVLCRLFKK QDESLEGSNG  60
EEMERTTSTN LTANYSPEEI QSDPAVKSVS SSQATEDDKK LAVIPLTPEE AISNVITPVG  120
CQNDGCDAYD AQNQIAAGDP SKEEDLQVNM DIFYDPSELF DDKLFSPLHK HIPEELFHQS  180
NNEANGHFGL QHQCGTNEIS ISDFFDSVIN WDEISGDNSS GQTPNSAWFD VQHNESWGNS  240
NVDMVHARPL QVGGADYPGD ATEGKLPLLK TREFNPNTSY DNALSNNMGL FHNHSQMAFS  300
SDVNMLQGYH ATNNYEQPTN FNMAMANSDN TGIRIRSRPP GYEGPNVNSN MQPQGTAPRR  360
IRLARSLAPQ HMSNEAAKDS SYESKDQNSQ LTTAREMETS KDLAAGESVT VTSDVEEQET  420
SPVENKEFED FNTVQQSTSS ASSNLSTCSS DSEVSYEAEK ESGWTSEDHS PKPAAAGASK  480
ASEDQVPSEC VNDITDDVDE PRIPNAYTLE VSKEESFSDS QSKDSLLRRK VCYPSKSSSN  540
LAKWYSVIAV SATLVVLLAF LVNTWGYGYY LKV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.PX0QP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	JX569045	9e-85	JX569045.1 Glycine max NAC transcription factor (NAC012) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016166342.1	0.0	protein NTM1-like 9
Refseq	XP_025669013.1	0.0	protein NTM1-like 9
TrEMBL	A0A444YAM6	0.0	A0A444YAM6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5551	33	53

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	7e-30	NAC transcription factor-like 9