PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.PT231 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 343aa MW: 37989.7 Da PI: 6.2382 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 118.9 | 5e-37 | 44 | 159 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 l pGf+F+Ptd el++++Lk+kv+gkkl+ vi+e++ +L+ +++ ewyfF+ r kky g+++nra+k+gyWkatg dk++++++++ Araip.PT231 44 LSPGFHFNPTDVELLKYFLKRKVTGKKLPN--VIAEINS------HLK----SGDLEWYFFCARGKKYGIGSKTNRAIKNGYWKATGMDKAIVQHDKQ 129 579************************887..7888764......564....57789***************************************** PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+ k+Lvf++g+ap+g+ tdWvmheyrl Araip.PT231 130 TVGMMKILVFHTGKAPHGTPTDWVMHEYRL 159 ****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.89E-45 | 40 | 182 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.539 | 44 | 182 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.6E-24 | 46 | 159 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence Send to blast |
MASSLPQSLS SFPTTIRETV PLLWKGAADQ VAIGKKDYME KGKLSPGFHF NPTDVELLKY 60 FLKRKVTGKK LPNVIAEINS HLKSGDLEWY FFCARGKKYG IGSKTNRAIK NGYWKATGMD 120 KAIVQHDKQT VGMMKILVFH TGKAPHGTPT DWVMHEYRLQ DKDLTDKGIA QDSYVICKVF 180 RKEGHGPRTR SGAQYRKPFN EEDWDDDDHH VVEEGGTPST ALVAPVSIQS TTFDGSSYMK 240 PTSVSCESGP VATSPVPSTP SSDASIHTVN NVNNSTVTDL SKDEKTVPEE NIAAGDLLSK 300 FFEGLEDLES EYTPNGVGLD DFSPHGINYD DLRHLDLIDL NFL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-35 | 44 | 183 | 15 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.PT231 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016193540.1 | 0.0 | NAC domain-containing protein 82-like | ||||
Refseq | XP_016193541.1 | 0.0 | NAC domain-containing protein 82-like | ||||
Refseq | XP_016193542.1 | 0.0 | NAC domain-containing protein 82-like | ||||
Refseq | XP_025637757.1 | 0.0 | NAC domain-containing protein 82 | ||||
TrEMBL | A0A444ZXY8 | 1e-136 | A0A444ZXY8_ARAHY; Uncharacterized protein | ||||
STRING | AET03169 | 2e-75 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF30453 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.4 | 4e-55 | NAC domain containing protein 82 |