PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.NTH8A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 729aa    MW: 79477.5 Da    PI: 7.0621
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.NTH8AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.41.3e-32251308260
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g+Hnh+k
  Araip.NTH8A 251 EDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSH-DGQITEIIYKGTHNHSK 308
                  7****************************************.***************85 PP
2WRKY104.17.5e-33464522159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vkg+++prsYY+CtsagCpv+k+ver+++++k+v++tYeg+Hnhe
  Araip.NTH8A 464 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNTKYVITTYEGKHNHE 522
                  59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-28241309IPR003657WRKY domain
PROSITE profilePS5081123.835245309IPR003657WRKY domain
SuperFamilySSF1182901.03E-25248309IPR003657WRKY domain
SMARTSM007749.9E-36250308IPR003657WRKY domain
PfamPF031064.1E-25251306IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.8E-36449524IPR003657WRKY domain
SuperFamilySSF1182901.57E-28457524IPR003657WRKY domain
PROSITE profilePS5081137.734459524IPR003657WRKY domain
SMARTSM007743.3E-38464523IPR003657WRKY domain
PfamPF031062.6E-25465522IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    Send to blast
MDSDSKGGVF PAFPAKRSIA ERRGFNSNAA RINTARFRTN AITTSPFASP SPSSCSASPC  60
ITIPPGISPT ALLDSPIMLP NSQAMPSPTT GSFHWLSSLP LDQGNLNDAP DSSLKFKNNA  120
TLADPNPLPP YSASLNQVSS NWHMVKGGNT DCQSIVPVLP PIDFSFPEDF SKGQNAKSIE  180
SRSFNDVKMV NCSLVNVNKV EMMQISRSDE AGDESTLPKN VTLGGDIRRQ PVMEKDQKET  240
LLATGVVRTS EDGYNWRKYG QKQVKGSEYP RSYYKCTQPN CQVKKKVERS HDGQITEIIY  300
KGTHNHSKPH LGRRALGLST DEMSEMGEAG ENYAKLEGPG WKNVQPGAKD TKHSLDWKAD  360
GQERTSSTSV VTELSDPMST NKGKPLCAFE AEDTPEHSST LASNDGDEDG TTQALAPAED  420
DAEDDESDSK RRKKENYLVE STLPSRAVRE PRVVVQIETE IDILDDGYRW RKYGQKVVKG  480
NPNPRSYYKC TSAGCPVRKH VERASHNTKY VITTYEGKHN HEVPTARTNN HVSSNDGGLP  540
PSGPNGQSAL ALPGSAVIPK SENHQTLTSH FDRKPEFGSD FLRPSLVGAF SNNLKFGSSP  600
MCQMKYPSLS STMPYGSFGL NPDRCTAPQA GSIPSVYPDF PMPLPLNLPS SGNFSLAGLN  660
FNCAKPMNPV QPFLSGQQVK DIDTGFLRPK QEQKDDAIYG TCLPPVDHGN SSSAAPSSIY  720
QQVMQNFPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-32243524577Probable WRKY transcription factor 4
2lex_A3e-32243524577Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.NTH8A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025649608.10.0WRKY transcription factor SUSIBA2
TrEMBLA0A444ZR120.0A0A444ZR12_ARAHY; Uncharacterized protein
STRINGXP_007139725.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.15e-88WRKY DNA-binding protein 2