PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.NCA4A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 608aa    MW: 65403.2 Da    PI: 7.036
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.NCA4AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.64.5e-32253310260
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  Araip.NCA4A 253 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 310
                  8****************************************.***************85 PP
2WRKY106.11.8e-33427485159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  Araip.NCA4A 427 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 485
                  59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.766247311IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-27249311IPR003657WRKY domain
SuperFamilySSF1182905.75E-25250311IPR003657WRKY domain
SMARTSM007742.5E-34252310IPR003657WRKY domain
PfamPF031061.1E-24253309IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-37412487IPR003657WRKY domain
SuperFamilySSF1182902.48E-29419487IPR003657WRKY domain
PROSITE profilePS5081138.825422487IPR003657WRKY domain
SMARTSM007743.1E-39427486IPR003657WRKY domain
PfamPF031063.7E-26428485IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 608 aa     Download sequence    Send to blast
MDSAQENSLT ELRQSSSGNA AELQSEDPNR SFPQPDAGAT SSANAGGARY KLMSPAKLPI  60
SRSPCVTIPP GLSPTSFLES PVLLSNMKGL RLKASQVEPS PTTGSLSKLH QTGHGSVTSA  120
AVSTTFPVTT VCFNTSTVDD RTSSFFEFKA HNRSNMVNAD FNNHVNEKST QIDVQGKAPC  180
FPSSPSVKSE IAVTSNELSL SSPVQMVSSG ASSHVEVDMD EFNHGGSTAG GLQASQVESK  240
SNGLPVASDR VSDDGYNWRK YGQKLVKGSE FPRSYYKCTH PNCEVKKLFE RSHDGQITEI  300
IYKGTHDHPK PQPNRRYSAG SIMSMQDERS DKVSFAGRDD KVSNIYGQVS HVAEPGSTPE  360
LSPGAASVDS PEGAGLASNK INDELDDDDP FSKRRKMDLG CADITPVVKP IREPRVVVQT  420
LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTNAGCPV RKHVERASHD PKAVITTYEG  480
KHNHDVPTAK NSSHDMAGQA ASIGQARIRP EESDTISLDL GMGLNQAAEN GSNGQGRVPL  540
SEFGGSQTHT SNSSFKFVHA TSAPVYFGVL NNGSIPSYGS RENLSDSTSL NHSTYPCPQN  600
MGRILTGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-37239487377Probable WRKY transcription factor 4
2lex_A6e-37239487377Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.NCA4A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177973.10.0probable WRKY transcription factor 20
RefseqXP_025626805.10.0probable WRKY transcription factor 20
SwissprotQ93WV00.0WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A445ANR00.0A0A445ANR0_ARAHY; Uncharacterized protein
STRINGGLYMA18G09040.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.20.0WRKY family protein