PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.MX2SJ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 236aa    MW: 26128.1 Da    PI: 9.8852
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.MX2SJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.5e-1254100354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+++E+rRRdriN  +  Lr+l+Pk+      K++Ka+ L  ++e +k+L
  Araip.MX2SJ  54 KSHSQAEKRRRDRINAQLTSLRKLIPKS-----DKMDKAALLGSVIEQVKDL 100
                  79*************************8.....7*************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.7851100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-1252103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-1054100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.94E-954103No hitNo description
Gene3DG3DSA:4.10.280.107.4E-1454103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-957106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048732.60E-5144186No hitNo description
Gene3DG3DSA:3.30.70.2609.1E-4144204No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MENYDHCSLF LDPSQTLPHV SDCNSLHRQF GGEFHSWPAP VEVVAGDRAA SASKSHSQAE  60
KRRRDRINAQ LTSLRKLIPK SDKMDKAALL GSVIEQVKDL KRKAIEVSKA VTVPTESDEI  120
TIEYDPSARD ESLKIKNKVV IKASVCCDDR PELFSELIQV LKGLRLTAVR ADIASVGGRI  180
KGTFLLCSKD SEKGVCLGTL KHSLKSVVTK IASSSIATNW PTRSKRQKFF LPSHFI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.MX2SJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179328.11e-173transcription factor bHLH51-like
TrEMBLA0A445B8C71e-168A0A445B8C7_ARAHY; Uncharacterized protein
STRINGXP_007163561.11e-111(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57963351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.17e-54bHLH family protein